Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1226 ATGCTTTTGGGAATTTTGGGAAGCCCATTTGTGTGCAGGGTGAAGATTGCCCTCAAGTTGAAGGGAGTTGAATACAAATATGTAGAAGAAAATTTGGCGGACAAGAGTGATCTGCTCCTCAAATACAACCCAGTTTACAAGAAGGTTCCAGTGTTTGTTCACAATGAGAAACCCATACCAGAGTCCCTTGTGATTGTTGAGTACATTGATGAAACATGGAAACACAACCCCATCTTGCCTTCTGAACCATACCAGAGAGCCTTGGCTCGTTTCTGGTCCAAGTTCATAGATGACAAGGTTGTGGGTGCTGCAGTGAAAGCTGTTCTCAATGTTGATGTGAAAGAGCGTGAGAATAATGTTAAAGAAACATTGGAGGCTTTGCAGTTTCTTGAGAATGAGCTCAAGGACCACAAGTTCTTTGGAGGAGAGGAGGTTGGGTTGGTAGATATTGCTGGTGTCTTCATAGCATTTTGGATCCCTATGATTCAAGAAATAGCGGGGTTGGAGTTATTGACCAGTGAGAAATTTCCTAAGCTTTACAAGTGGAGCCAAGAATTTGTGAACCATCCAGTTGTGAAAGAAAGTCTTCCCCCTAGAGACCCAGTTTTTGGCTATTTCAAAGGACTCTATGAAAGCCTTACTGCTTCAAAATAG 654 0.4251 MLLGILGSPFVCRVKIALKLKGVEYKYVEENLADKSDLLLKYNPVYKKVPVFVHNEKPIPESLVIVEYIDETWKHNPILPSEPYQRALARFWSKFIDDKVVGAAVKAVLNVDVKERENNVKETLEALQFLENELKDHKFFGGEEVGLVDIAGVFIAFWIPMIQEIAGLELLTSEKFPKLYKWSQEFVNHPVVKESLPPRDPVFGYFKGLYESLTASK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1226 217 Gene3D Glutaredoxin 1 81 - -
Ssu3g1226 217 CDD GST_C_Tau 83 209 IPR045074 GO:0004364|GO:0006749
Ssu3g1226 217 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 82 205 IPR010987 -
Ssu3g1226 217 SFLD Main (cytGST) 2 215 - -
Ssu3g1226 217 Gene3D - 82 217 - -
Ssu3g1226 217 Pfam Glutathione S-transferase, C-terminal domain 112 190 IPR004046 -
Ssu3g1226 217 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 2 213 - -
Ssu3g1226 217 Pfam Glutathione S-transferase, N-terminal domain 2 71 IPR004045 -
Ssu3g1226 217 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 2 213 IPR045073 -
Ssu3g1226 217 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 77 IPR004045 -
Ssu3g1226 217 SUPERFAMILY Thioredoxin-like 3 100 IPR036249 -
Ssu3g1226 217 SUPERFAMILY GST C-terminal domain-like 71 211 IPR036282 -
Ssu3g1226 217 CDD GST_N_Tau 1 73 - -
Ssu3g1226 217 SFLD Main.3: Omega- and Tau-like 2 215 IPR045073 -
Ssu3g1226 217 Coils Coil 113 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1226 Ssu-Chr3 29830412 29831433 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1226 2 216 Glutathione S-transferase Gene Family AT3G09270 50.691 2.52e-76 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1226 K00799 - gmx:100500052 377.867