Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1225 ATGAAGATACGAGAATTTCCATGTTGTACAGCTCAATTGTATTGTTACGATATTGCTGATGTTGTGGGTACTGCATGGAAAGCTGTTTTCACGGTTGATGAGAAAGAGCGTGAGAATAATGTTAAAGAAACATTGGAGGCTCTGCAGTTTCTTGAGAATGAGCTCAAGAACCGGAAGTTCTTTGGAGGAGAGGAGGTTGGGTTGGTAGATATTGCTGCTGTCATCATAGCATTTTGGATCCCTATCATTCAAGAAATAGCGGGGTTGGAGTTATTGACCAGTGAGAAATTTCCTAAGCTTTACAAGTGGAGCCAAGAATTTGTGAACCATCCAGTTGTGAAAGAAAGTCTGCCCCCTAGAGACCCAGTTTTTGCCTTTCTCAAAAGACGCTATGAAAGCCTTTCTGCTTCAAAATAG 417 0.4149 MKIREFPCCTAQLYCYDIADVVGTAWKAVFTVDEKERENNVKETLEALQFLENELKNRKFFGGEEVGLVDIAAVIIAFWIPIIQEIAGLELLTSEKFPKLYKWSQEFVNHPVVKESLPPRDPVFAFLKRRYESLSASK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1225 138 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 1 126 IPR010987 -
Ssu3g1225 138 Gene3D - 13 138 - -
Ssu3g1225 138 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 22 134 IPR045073 -
Ssu3g1225 138 Pfam Glutathione S-transferase, C-terminal domain 14 111 IPR004046 -
Ssu3g1225 138 CDD GST_C_Tau 18 130 IPR045074 GO:0004364|GO:0006749
Ssu3g1225 138 SUPERFAMILY GST C-terminal domain-like 14 132 IPR036282 -
Ssu3g1225 138 Coils Coil 34 54 - -
Ssu3g1225 138 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 22 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1225 Ssu-Chr3 29812208 29813770 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1225 34 137 Glutathione S-transferase Gene Family AT3G09270 47.115 5.34e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1225 K00799 - gmx:100500052 208.379