Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1224 ATGGCTGCTAGTCAGGAAGAGGTGACGCTTTTGGGAGTTACGGGAAGCGCATTTGTTTGCAGGGTTCAGATTGCTCTCAAGTTGAAGGGAGTTGAATACAAATATGTGGAGGAAAATTTGGGGAATAAGAGTGATCTGCTCCTCAAGTATAACCCAGTTTACAAGAAGGTTCCAGTGTTTGTTCACAATGAGAAACCCATACCAGAGTCCCTTGTGATTGTTGAGTACATTGATGAGACATGGAAACACAACCCCATCTTGCCTTCTGATCCCTACCAAAGAGCCTTAGCTCGTTTCTGGTCCAAATTCATAGATGACAGGGTTGTGGGTGCTGCATGGAAAGCTGTTTACACGGTTGATGAGGAAGAGCGTGAGAAAAATGTTGAAGAATCATTTGAGGCTCTGCAGTTTCTTGAGAATGAACTCAAGGACAAGAAGTTCTTTGGAGGAGAGGAGTTTGGGTTGGTAGATATTGCTGCTGTCTACATAGCATTTTGGATCCCTATTTTTCAAGAAATAGGGGGGTTGGAGTTATTCACCAGTGAGAATTTTCCTAAGCTGTACAAGTGGAGCCAGGAATTTGTGAACCATCCAGTTGTGAAAGAAAGTCTGCCCCCTAGAGACCCAGTTTTTGCCTTTCTCAAAAGACGCTATGAAAGCCTTTCTGCTTCAAAATAG 678 0.4351 MAASQEEVTLLGVTGSAFVCRVQIALKLKGVEYKYVEENLGNKSDLLLKYNPVYKKVPVFVHNEKPIPESLVIVEYIDETWKHNPILPSDPYQRALARFWSKFIDDRVVGAAWKAVYTVDEEEREKNVEESFEALQFLENELKDKKFFGGEEFGLVDIAAVYIAFWIPIFQEIGGLELFTSENFPKLYKWSQEFVNHPVVKESLPPRDPVFAFLKRRYESLSASK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1224 225 Gene3D Glutaredoxin 1 89 - -
Ssu3g1224 225 CDD GST_N_Tau 8 81 - -
Ssu3g1224 225 SFLD Main.3: Omega- and Tau-like 5 223 IPR045073 -
Ssu3g1224 225 Pfam Glutathione S-transferase, N-terminal domain 7 79 IPR004045 -
Ssu3g1224 225 CDD GST_C_Tau 91 217 IPR045074 GO:0004364|GO:0006749
Ssu3g1224 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 221 IPR045073 -
Ssu3g1224 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Ssu3g1224 225 SUPERFAMILY GST C-terminal domain-like 79 219 IPR036282 -
Ssu3g1224 225 Pfam Glutathione S-transferase, C-terminal domain 115 198 IPR004046 -
Ssu3g1224 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 213 IPR010987 -
Ssu3g1224 225 PANTHER GLUTATHIONE S-TRANSFERASE-RELATED 1 221 - -
Ssu3g1224 225 Gene3D - 90 225 - -
Ssu3g1224 225 SUPERFAMILY Thioredoxin-like 8 107 IPR036249 -
Ssu3g1224 225 SFLD Glutathione Transferase (cytosolic) 5 223 IPR040079 -
Ssu3g1224 225 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1224 Ssu-Chr3 29804174 29805176 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1224 4 224 Glutathione S-transferase Gene Family AT3G09270 52.915 3.02e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1224 K00799 - gmx:100807613 396.356