Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1197 ATGCTATGCAATTCTATGTTATTCTTTATGCAACCCATTCCCTTCTTCTCCTCTCATTTCTATGTCATTGAAGGGTACCTGTCCAATGATGAATCGCCCAAGCAAAGGGAGAAGCCTGACATGTCCATATTCAAAAATGCTGTTCAGGATTGCTTTTCCTACGATCCCCCCAAAGTGCACAAACCAAGCATACATAGTATGTGTAGTGGTTTTTGTAATAACTATGCTCGATGGATTGAAATTCTTAAGGACTTGAAGAACATGCAAGAACAAGCAAGAAACAGTCTTCACTACCATAAAGTAAATGATGATTCTCCCATTGTTCAGGTATGCAAATTGTGTAAATGCCCATTGGAGGGGTATTTTACAAGCAGACCAGCTCTTAAAGATTATGCCAGATTGATGAGTGGACCATCAAATTCAATGGCTTATAGTAGAAGCAGAGCCTCCTCTGTTTTGGATGGCTTCACTCTGAATCCCCTGCCATATCCCATTCTGTTAATCTTAGCATTGATCTTCATCTTCCTTTGCATTTCATGGTACTTTTCCCATGAAGAAGTGGTTGAAACTGCTAAAGAACAATTGGGTTGGGTATTATTTGCCACCCCAATGGTGTTAATACTCATAGTTTGTTGGTTATCATCAATGGAGAATTCAGATTGGTTCAATGGTTTGTTATCATGGGAAAGGCGCAGGAAAACCAGCCAAAGTCCTTTAGAAATGAGCTCTCCATGGGGTGTGGCTGCTTTGATCTAG 756 0.4034 MLCNSMLFFMQPIPFFSSHFYVIEGYLSNDESPKQREKPDMSIFKNAVQDCFSYDPPKVHKPSIHSMCSGFCNNYARWIEILKDLKNMQEQARNSLHYHKVNDDSPIVQVCKLCKCPLEGYFTSRPALKDYARLMSGPSNSMAYSRSRASSVLDGFTLNPLPYPILLILALIFIFLCISWYFSHEEVVETAKEQLGWVLFATPMVLILIVCWLSSMENSDWFNGLLSWERRRKTSQSPLEMSSPWGVAALI 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1197 251 PANTHER EXPRESSED PROTEIN 142 251 - -
Ssu3g1197 251 PANTHER EXPRESSED PROTEIN-RELATED-RELATED 142 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1197 Ssu-Chr3 28825066 28827270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1197 25 86 Core DNA Replication Machinery Family AT2G20980 38.710 6.76e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1197 - - gmx:100813444 144.05