Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1101 atggAGGGTCATCATCTCCATCACCATCACcggcagcaacaacaacaacatcatcatcaacaacaacagcaTCACCACCCTCACAACATCACAACTAGTGCTAACGTGGATGCCACGGATAGGTTCCCCCAATGGAGCATCCAAGAGACAAAAGAGTTCCTCGTGATCCGCGCCGAGCTGGATCAGACTTTCATGGAGACAAAGAGGAACAAGCATGCTTTGGGAAGTCATCTCCAACCGGATGAAGGAAAAGGGTTACCATAG 264 0.4167 MEGHHLHHHHRQQQQQHHHQQQQHHHPHNITTSANVDATDRFPQWSIQETKEFLVIRAELDQTFMETKRNKHALGSHLQPDEGKGLP 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1101 87 MobiDBLite consensus disorder prediction 1 25 - -
Ssu3g1101 87 PANTHER - 1 73 - -
Ssu3g1101 87 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 73 - -
Ssu3g1101 87 MobiDBLite consensus disorder prediction 1 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1101 Ssu-Chr3 26062887 26063150 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1101 1 71 Trihelix Transcription Factor Family AT2G38250 53.521 8.96e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1101 - - gmx:100794230 98.9821