Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1100 atgggtgttggtgatgtgGGATGTGAAACGATGGAGCCAGAAGCTACGAGGCAGCAATTCCCGTTTTACAATGAGCTTCAAGCGATTTTCGCAGCGAGGATGCAGAGAATGTTGTGGGCTGAAGCAGAAGGAGGGTCCAAGAAGAAGGGGGTGCAGCTATCTTCTGAGGATGAGGAAGAAGGCAATGAAGAGAGTGAGGGGGATCACAAGGGTAGCACGAgcaggaagaagaagaagaagggcaAGATGGTAATTGGTGGAggaagtggtggtggtggtggtggtaacaaTAGTAATTTGGAGAACTTGAAGGAGATTATGGAAGAGTTCATGAGGCAACAGATGCAAATGGAGGCTCAGTGGATGGAAGCGTTTGAGGCAAGGGAGAATGAGAGGAGGTTGAAGGAGATTGAGTGGAGGCAAACCATGGAGGCATTGGAGAATGAGAGGATAATTATGGATCAAAGATGGAGAGAGAGGGAAGAGCAAAGAAGGATTAGAGAAGACGTTAGGGCTGACAAGAGAGATGCTCTAATCACTGCTCTCCTGAACAAGCTCAGAAGAGAAGAGATGTAG 576 0.4167 MGVGDVGCETMEPEATRQQFPFYNELQAIFAARMQRMLWAEAEGGSKKKGVQLSSEDEEEGNEESEGDHKGSTSRKKKKKGKMVIGGGSGGGGGGNNSNLENLKEIMEEFMRQQMQMEAQWMEAFEARENERRLKEIEWRQTMEALENERIIMDQRWREREEQRRIREDVRADKRDALITALLNKLRREEM 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1100 191 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 8 189 - -
Ssu3g1100 191 MobiDBLite consensus disorder prediction 43 100 - -
Ssu3g1100 191 PANTHER - 8 189 - -
Ssu3g1100 191 Coils Coil 100 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1100 Ssu-Chr3 26061907 26062566 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1100 7 190 Trihelix Transcription Factor Family AT5G01380 47.115 1.73e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1100 - - gmx:100778195 233.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1100 3 26061907 26062566 Ssu3g1100 3 26061907 26062566 ECH