Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1065 ATGggggaaggagaagaaaatCTGGAGACCATGGATTTTAAACTACCCAGAAAGTTAAACTTCAATGCACCTCTTCTGTCAGCTAAGCGTTTTGGTTTTTCAGGTGTTGCAGATACATCTTGCTCGTCAAACTCACTTGGTACAGCACAAAAGACAACAGTTCCATTTTCGTGGGAACAAGCCCCAGGGAAGCCAAAAGCAATGGAGAGGAGTGATGGCATCTATGATGGAGACATAGACAGCCCTCGGCTAAGACCACCTCCTTGCCTTTGGCACCCACTAGAAGAAGCAGCTAAGGCTGATGTGTATAATGGTGTTCTTGCATTTGATCAAGATGATGGTTGTGATGGcgacgacgacgacgatgaCGAGGATGATGACAAGAATGATGCATTTTCAGATGCAATGGATGTTTTATCTCTATCAGAGGCCTCAGACATTATGCAACAATCAGAAACAGCTCATAGTGACAGCAATGATGGGTTGAGATTAAAGCTTGCAGGGTCTAATGGTGGTCAATCTCCAACTTATATGATCAACCGTTTTCTTCCAGATGCCAATGCATTGGTTGCATCATCTGCTGTACATTTTTCCAAAGATTCCAAAGTTTATACTTACAGTCATGAGGCTTATCTCAAAGGTTCCACTAGACATTCATATGCTTCTTCTCCAAAAGGTTGTGGCCTggaatttctcttctcttggcTTATGAAGAATAAGCTCTGTGCTATAAAGAGCCCTGTCCTACCATCATTTACAAATGTGCAGAAGCATCAGCACAGATCAAAACATATGAAACATCGTTCATCAGTCCACAAGCCCTGCACAAATGTGAAAGAAGATATTTGA 849 0.3922 MGEGEENLETMDFKLPRKLNFNAPLLSAKRFGFSGVADTSCSSNSLGTAQKTTVPFSWEQAPGKPKAMERSDGIYDGDIDSPRLRPPPCLWHPLEEAAKADVYNGVLAFDQDDGCDGDDDDDDEDDDKNDAFSDAMDVLSLSEASDIMQQSETAHSDSNDGLRLKLAGSNGGQSPTYMINRFLPDANALVASSAVHFSKDSKVYTYSHEAYLKGSTRHSYASSPKGCGLEFLFSWLMKNKLCAIKSPVLPSFTNVQKHQHRSKHMKHRSSVHKPCTNVKEDI 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1065 282 MobiDBLite consensus disorder prediction 111 131 - -
Ssu3g1065 282 MobiDBLite consensus disorder prediction 36 57 - -
Ssu3g1065 282 MobiDBLite consensus disorder prediction 146 167 - -
Ssu3g1065 282 PANTHER N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED 6 280 - -
Ssu3g1065 282 MobiDBLite consensus disorder prediction 65 79 - -
Ssu3g1065 282 Pfam Protein of unknown function (DUF688) 17 201 IPR007789 -
Ssu3g1065 282 MobiDBLite consensus disorder prediction 112 131 - -
Ssu3g1065 282 PANTHER DUF688 FAMILY PROTEIN 6 280 - -
Ssu3g1065 282 MobiDBLite consensus disorder prediction 36 82 - -
Ssu3g1065 282 MobiDBLite consensus disorder prediction 260 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1065 Ssu-Chr3 24950775 24951623 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1065 - - gmx:102663314 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g0889 2 45343049 45345737 Ssu3g1065 3 24950775 24951623 PCT