Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0982 ATGGAGGGCCTGAGACATCCCAATTTATCAATGATCACCTATTTCACCACCTCAAGAGTAGGGAAGCGTGGGAGGCTGGTGAAAGCTGCGCTTCAAGAAGCCgcaaagaagagagaaatgagatatccatatttaaagaaaattgatcCTGGAGTTCGTCGGCATTTCCATGATGATATCACAGTGATTGTTGTGTATCTTGACTCAAATATCGTGAGTAGGGCAAGCACTTTCTAG 237 0.3797 MEGLRHPNLSMITYFTTSRVGKRGRLVKAALQEAAKKREMRYPYLKKIDPGVRRHFHDDITVIVVYLDSNIVSRASTF 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0982 78 Gene3D - 10 69 IPR036457 -
Ssu3g0982 78 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 18 77 - -
Ssu3g0982 78 PANTHER ALPHABET, ISOFORM E-RELATED 18 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0982 Ssu-Chr3 23012976 23016386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0982 19 76 PP2C-type Phosphatase Gene Family AT4G38520 77.586 3.68e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0982 - K01102 nnu:104603663 96.6709