Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0961 ATGCAACGCCGTTTTCTGGACACGGAGCTGAGCATGCCACCCTCGTACGgcaacaagaacaacaacaacacggGCGGCGCGTTCATCAGCAACACGAACTTCGACACCAACATGGTCATCATTCTGGCGGCGCTGCTGTGCGCGTTGGTGTGCGCGCTGGGGCTGAACTCCATCGCTCGCTGCGCGCTGCGGTGCGGGTGGCGGCTCGGCGACGAGACGGCGGAGCAGCACGCGGCGCGGCTGGCGGGGACGGGGCTGAAGCGCCGCGAGCTCAGCCGGATCCCGGTGGCGGTGTACGGCGGCGGCGACGACATTCCGGCGACCGAGTGTCCCCATATGCCTCGGCGATTTCGAGAAAGGGGACAGGGTCCGAATGCTGCCCAAGTGCAACCACGGGTTCCACGTGAGGTGCATTGA 417 0.6307 MQRRFLDTELSMPPSYGNKNNNNTGGAFISNTNFDTNMVIILAALLCALVCALGLNSIARCALRCGWRLGDETAEQHAARLAGTGLKRRELSRIPVAVYGGGDDIPATECPHMPRRFRERGQGPNAAQVQPRVPREVH 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0961 138 MobiDBLite consensus disorder prediction 1 22 - -
Ssu3g0961 138 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 1 111 - -
Ssu3g0961 138 MobiDBLite consensus disorder prediction 115 138 - -
Ssu3g0961 138 PANTHER RING-H2 FINGER PROTEIN ATL74 1 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0961 1 110 C3H Transcription Factor Family AT3G10910 47.899 2.18e-22 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0961 K19040 - gmx:100814602 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0961 3 22611119 22611535 Ssu3g0961 3 22611119 22611535 ECH