Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g0944 | ATGGAGCCGCGTGACGCCGCGCCCTTCGAGATATCCGGAGCTTCGTCTCAGGAGAGGGCGAGTAACAGCAAATCCCAGAGGGTTAGGCACAAGAGTGTGCAGCATGATGATGATGCCTTACACGAGGACAGTGCGAGGTTGATCTATGTCAATGATCCGAGGAGGACGAACGACAAGTACGAGTTCACGGGAAATGAGATCCGGACTAGCAAGTACACGTTTGTTACGTTCCTGCCCAAGAATTTGTTCATTCAGTTCCACAGGGTTGCCTATCTGTATTTCCTCGCCATTGCGGCTCTCAACCAGCTTCCTCCGCTGGCGGTGTTTGGGAGGACGGTGTCCCTTTTCCCGCTCTTGTTCGTGCTGTGTGTCACGGCTATTAAGGATGGGTATGAGGACTGGCGGAGGCACCGGTCGGATCGCAATGAGAACAACAGAGAGTCTCTGGTGCTTCAGTCTGGCGATTTCCGGTCgaggaaatggaagaaaatacaCGCCGGTGAGGTTGTTAAGATCTTTGCCGATGAGACAATCCCGGCTGACGTGGTGCTGTTGGGGACGAGCGATCAAAGCGGGCTTGCCTACATTCAGACAATGAATTTGGATGGAGAGTCGAATTTGAAGACGAGGTATGCTAGGCAGGAAACAGCCTCGGTGGTTTCTTCGGAGGCGTGTGATGTTTTCGGGGTGATTAGATGCGAGCAACCGAACCGGAATATTTATGAGTTCACGGCCAACATGGAGTTCAATGGACTGAAGTTTTCCCTTAGCCAGTCAAACATTGTTCTGCGAGGCTGCCAACTGAAGAACACGGATTGGATTATTGGTGTTGTTGTTTATGCAGGACAGGAAACAAAAGCAATGCAGAACAGCGCAGCTTCTCCTTCCAAGAGAAGCAAACTGGAAAGTTACATGAACAGAGAGACCCTTTGGttgtcaatttttcttttcatcatgTGCTTGGTTGTGGCTCTTGGGATGGGTCTTTGGCTGGTACGCCACGAGAACCAGCTTGATTCCTTGCCTTACTACAGAAAAAGATACTTCACCAATGGGCCAGATAATGGGAAGAAATATAAGTATTATGGGATACCAATGGAagcatttttctcctttttgagTTCTGTTATAGTGTTTCAGATAATGATACCAATATCTCTTTACATCACAATGGAGTTGGTTCGATTGGGTCAGTCATACTTCATGATTGAAGACAGGGATATGTATGATGCCAGCTCTGGGTCAAGGTTTCAGTGTagatcattaaatataaatgaagatTTGGGGCAAATACGCTATGTATTTTCTGACAAGACAGGAACACTAacagaaaacaaaatggaattCCGAAGGGCTAGTGTACACGGGAAGAATTACGGGAGCTCCTTGCTTATGGTTGATAATACAGCAGCAGCAGATGTTACTCCTAAACGGAGATGGAAGCTCAAATCTGAAATTGCAGTTGATTCTGAACTGATGACAATGTTGCGGAAAGACtcaaatagagaagaaagagtTGCTGCTCATGAGTTTTTTCTTACATTGGCTGCTTGTAACACTGTAATCCCTATACTTGGCGATGATGGAATTTCTAGTTGTGGAACTAATGAATTAAATGAAGATATTAGATACATTGATTACCAGGGAGAATCTCCTGATGAACAAGCTCTAGTTTCTGCAGCTTCTGCATATGGATATACTCTTTTTGAGCGAACATCTGGACATATTGTTATTGACGTCAACGGTGAGAAACTCAGATTGGACGTATTGGGCCTACATGAGTTTGATAGTGTGCGAAAGAGAATGTCTGTTGTTATTCGGTTTCCTGACAATGCGGTAAAGGTGTTAGTCAAAGGTGCTGATACTTCAATGTTTAGCATTTTGGAAAATGGCAATGAGAGCAACAATAACATATGGCATGCAACTCAGAGCCATTTGAGTGAGTATTCTTCACAAGGTTTGCGCACTCTTGTAGTTGGCTCCAGGGATCTTTCTGATGCTGAACTTGAGGAGTGGCAAAGCAGGTATGAAGAGGCAAGTACTTCGTTGACTGACAGAGCTACTAAACTGCGTCAAACAGCAGCTCTTATAGAAAGCAATTTAAAGTTACTTGGAGCAACTGGAATTGAGGACAAGCTACAAGAGGGTGTACCAGAAGCCATTGAGGCTCTACGGCAAGCTGGAATCAAGGTCTGGGTTCTTACTGGTGATAAGCAAGAGACGGCAATTTCAATTGGTCTTTCCTGCAAACTTCTTAGTGGAGATATGCAGCAGATTATTATAAATGGCACTTCAGAGGTCGAATGTAGAAATCTTTTAGCTGATGCTAAAGCCAAATATGGTGTGAAATCTTCAAGTGGAGGGCGTCGAAATCTGAATCGCAAAACCAATGTCGGGCATGGTGATCTTGATATTCCCAATGGTTCAAAGTCATTGAGCTTTCCCAAATGGAATCCTGGAAAGGAAGAAGGAACTAATGCTCCATTGGCACTCATAATTGATGGAAACAGTTTGGTTTATATTTTGGAGAAGGAACTGGAGTCAGAGCTTTTCGACCTTGCAACTTCCTGTAGGGTTGTGCTGTGTTGTCGTGTTGCACCCTTGCAAAAGGCAGGAATTGTTGATCTGATAAAGAGCCGCACAGATGATATGACACTGGCCATAGGTGATGGGGCCAATGATGTGTCAATGATCCAAATGGCAGATGTTGGTGTAGGAATATGTGGGCAGGAAGGGCGCCAAGCAGTGATGGCATCAGATTTTGCTATGGGACAGTTTCAGTTCTTGAAGAAATTACTTCTGGTTCATGGGCACTGGAATTATCAGCGTGTCGGTTATTTAGTTCTGTACAACTTCTACCGCAATGCTGTCTTTGTATTGATGTTATTTTGGTATATATTATGCACGGCTTTTTCTACAACTTCTGCGTTGACAGATTGGAGTAGTGTTTTCTATTCTGTGATATACACATCTATACCTACTATTATTGTTGGTATTCAGGACAAGGACTTGAGTCACAGGACACTCTTGCAGTATCCAAAACTGTATGGTGCAGGTCACAGGCAGGAAGCTTACAATATGCAATTATTTTGGATCACAATGATTGACACAGTATGGCAGAGCCTTGTTCTCTTCTACATTCCATTGTTCACCTATAAGGACAGTTCAATTGATATATGGAGCATGGGCAGTTTGTGGACGATTGCAGTTGTTATCCTTGTAAATGTACACCTGGCTATGGACATCAACCGTTGGGTATTAATTACTCATGTTGCTGTCTGGGGATCTTTAATCATTACATATGGTTGCATGGTGGTATTGGATTCTATACCTGTCTTTCCTAATTACTGGACTATTTATCATCTGGCAAGGTCCCCTACATATTGGATGACAATTTTGCTTATAATTATTGTGGCATTGCTCCCTCGCTTTATTTGCAAAGTTGTTTATCAGATCTTTTGGCCTTCGGATATCCAGATAGCTAGAGAAGCTGAGTTAATGAGAACACGTCCGGATAATTTGCAGCCGAGGCAACAAGATTCCAGTTAA | 3549 | 0.4258 | MEPRDAAPFEISGASSQERASNSKSQRVRHKSVQHDDDALHEDSARLIYVNDPRRTNDKYEFTGNEIRTSKYTFVTFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLCVTAIKDGYEDWRRHRSDRNENNRESLVLQSGDFRSRKWKKIHAGEVVKIFADETIPADVVLLGTSDQSGLAYIQTMNLDGESNLKTRYARQETASVVSSEACDVFGVIRCEQPNRNIYEFTANMEFNGLKFSLSQSNIVLRGCQLKNTDWIIGVVVYAGQETKAMQNSAASPSKRSKLESYMNRETLWLSIFLFIMCLVVALGMGLWLVRHENQLDSLPYYRKRYFTNGPDNGKKYKYYGIPMEAFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDRDMYDASSGSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVHGKNYGSSLLMVDNTAAADVTPKRRWKLKSEIAVDSELMTMLRKDSNREERVAAHEFFLTLAACNTVIPILGDDGISSCGTNELNEDIRYIDYQGESPDEQALVSAASAYGYTLFERTSGHIVIDVNGEKLRLDVLGLHEFDSVRKRMSVVIRFPDNAVKVLVKGADTSMFSILENGNESNNNIWHATQSHLSEYSSQGLRTLVVGSRDLSDAELEEWQSRYEEASTSLTDRATKLRQTAALIESNLKLLGATGIEDKLQEGVPEAIEALRQAGIKVWVLTGDKQETAISIGLSCKLLSGDMQQIIINGTSEVECRNLLADAKAKYGVKSSSGGRRNLNRKTNVGHGDLDIPNGSKSLSFPKWNPGKEEGTNAPLALIIDGNSLVYILEKELESELFDLATSCRVVLCCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFQFLKKLLLVHGHWNYQRVGYLVLYNFYRNAVFVLMLFWYILCTAFSTTSALTDWSSVFYSVIYTSIPTIIVGIQDKDLSHRTLLQYPKLYGAGHRQEAYNMQLFWITMIDTVWQSLVLFYIPLFTYKDSSIDIWSMGSLWTIAVVILVNVHLAMDINRWVLITHVAVWGSLIITYGCMVVLDSIPVFPNYWTIYHLARSPTYWMTILLIIIVALLPRFICKVVYQIFWPSDIQIAREAELMRTRPDNLQPRQQDSS | 1182 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g0944 | 1182 | Pfam | Phospholipid-translocating ATPase N-terminal | 48 | 113 | IPR032631 | - | |
| Ssu3g0944 | 1182 | Gene3D | - | 700 | 928 | IPR023214 | - | |
| Ssu3g0944 | 1182 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 441 | 717 | IPR023299 | GO:0000166 | |
| Ssu3g0944 | 1182 | TIGRFAM | ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase | 62 | 1163 | IPR006539 | GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326 | |
| Ssu3g0944 | 1182 | SFLD | p-type atpase | 419 | 939 | IPR044492 | - | |
| Ssu3g0944 | 1182 | Gene3D | - | 121 | 293 | - | - | |
| Ssu3g0944 | 1182 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Ssu3g0944 | 1182 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 437 | 443 | IPR018303 | - | |
| Ssu3g0944 | 1182 | SFLD | C1.7: P-type atpase like | 419 | 939 | - | - | |
| Ssu3g0944 | 1182 | PANTHER | PHOSPHOLIPID-TRANSPORTING ATPASE | 43 | 1180 | - | - |
Showing 1 to 10 of 23 entries
Duplication type information
Functional genes information
Pathway information
Event-related genes