Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0924 ATGACTTGTTCCCCCTTTCTCAGGTTGATGAAAAACAACACAACGCAAGTCATTGATCCACCCTCTACTGACGAAGAAGATGAAGAACCTCTGCCTCAAGAGTTTGTCCTTGTGGAAAAGACAGAACCGGATGGAACAATTGAGCAAATAATATTCTCTTCAGGTGGAGATATTGATGTTTATGATCTTCAAGCCCTCTGTGACAAGGTGGGGTGGCCGCGTAGACCATTGTCAAAATTAGCTGCCGCTTTGAAAAATAGCTATATAGTGGCCTCACTGCATTCTATAAGAAAGTCACCTGGGTCAGAGGGGAATGAACAGAAGAGATTAATTGGCATGGCCCGTGCTACGTCTGACCATGCCTTCAATGCCACAATTTGGGATGTCCTAGTTGATCCTGATTACCAGGGCCAAGGTCTTGGTAAAGCTCTTATAGAGAAACTGATTCGAGCTCTTCTGCAAAGGGACATTGGCAATATAACTCTGTTTGCAGATAGTCAAGTTGTGGAATTTTATCGCAATTTAGGCTTTGAAGCTGACCCAGAGGGCATAAAAGGCATGTTTTGGTACCCAAATCACTAA 582 0.4364 MTCSPFLRLMKNNTTQVIDPPSTDEEDEEPLPQEFVLVEKTEPDGTIEQIIFSSGGDIDVYDLQALCDKVGWPRRPLSKLAAALKNSYIVASLHSIRKSPGSEGNEQKRLIGMARATSDHAFNATIWDVLVDPDYQGQGLGKALIEKLIRALLQRDIGNITLFADSQVVEFYRNLGFEADPEGIKGMFWYPNH 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0924 193 Gene3D - 54 190 - -
Ssu3g0924 193 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 59 182 IPR016181 -
Ssu3g0924 193 PANTHER ACETYLTRANSFERASE NSI 8 192 - -
Ssu3g0924 193 PANTHER ACYL-COA N-ACYLTRANSFERASE 8 192 IPR045039 GO:0008080
Ssu3g0924 193 CDD NAT_SF 106 162 - -
Ssu3g0924 193 Pfam Acetyltransferase (GNAT) family 59 177 IPR000182 GO:0016407
Ssu3g0924 193 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 50 193 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0924 Ssu-Chr3 22075509 22079249 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ssu3g0924 Acetyltransf_1 4.5e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0924 K22450 - gmx:100799333 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0924 3 22075509 22079249 Ssu3g0924 3 22075509 22079249 ECH