Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0912 ATGGAAGCTGAAGGCCAATGGCAGATTTCGGAGAGAGGGATATGTTGGTCAATGGTGTTCATGGTGGCATGGAgcatcataatattattatatgtgaaGCTGTGGTATAGTCCTCAAAGGATCCGAAAAGTGCTTCAGAAGCAAGGCATCAATGGACCAAAGCCTTCCTTCCCCTTTGGAAACATTTCTGAGATGCAACAGGTCAATCAATTAGCTCCTGTTTCTCTTGAAGCCTTAGACGAATGGGCTTATTCCCTCTACCCATATTTCCATACATGGAGGCAACGCTATGGTCCAGCGTTCATGTATTCCACTGGAATCAAACAACATCTATATGTGGAGATACCGGAATTAATAAAATGGATAGGTCTGAACAAGTCCTTGGATCTTGGCCGGCCGAAGCATCTAATCAAAACACTGAAGCCTTTGCTGGGTGACGGCATCCTTATGTCTAATGGACTACAGTGGGCCTTCCAAAGGAATCTACTTGCTCCTGAGCTTTTCCAGAGCAAAATTAagAATTGGGTGGATATAATGGTAGAATCTACCATGGCAATTATCAAAAAATGGAAGAGCCATATAACAGAAAGTGAAGGGGGGATTGCAGAGTTGGTGATTGATGGAGATCTGAAGGCTCTAACAGCGGATGTCATTTCAAAAGCTTGTTTTGGTACCTCTTATGCTCaaggaaatttaatttttgcaaaactggCCACTATGCAAGCGATACTAGCTAAGCCTAGTGTTCTATTTGGATTTATAAACCTAAGGTTTCTTCCCACCAAGGAAAACAAAGAGTTATGGAAGTTGCAGAAAGAGGTGGAAACGATGATACTAAAAGTGATAAAAGACCGTGAAGCAGAAAACCAAAAGAGTAGCACACATGGGAATCAAAAGGATCTATTACAAATAATACTAGAAGGTGCTGCCAGTGCCACCACTGATGGTGGTAGAAAGGGTATTTTTGGGCCCCGGTACAACATAAACCAGTTGATTCTAGACATCtgcaaaaatatatactttGCAGGCTCTGAGAGCACTGCTCTTGCAATTATTTGGACACTGCTGCTACTTGCCTTACATCCTGACTGGCAACAACGTGTTAGATCTGAGATTATGGAGACCTACGATATCATGTTGCCTCATTCCTTTCATGACATGGACAAACTTCGAAACTTGAAAGCACTAACAATGGTGATTCAAGAGAGTCTACGTCTTTATGGGCCTTCAACTATGGCCACAAGGGAAGTGTTGGCTGATGAGGTGAAGCTGGGGGAACATGTGCTGCCCAAAGGCATCAACGTGTGGCTGTTCACACTCGCATTGCACCGTGACCCTGATAATTGGGGACCAGATGCTAGGGAGTTCAAGCCAGAAAGGTTTGCTGGTGGTGTTTCTGCGGCCTGTAAGTATCCCCAAGCTTATATACCGTTTGGCCTCGGGAATCGAATTTGCCTGGGCCAAAACTTTGCCTTGCTAGAAATGAAGGAAGCACTGTGTCTTCTTCTCGCCAACTTCTCCTTTGCTGTTTCACCAAACTATCGCCATTGTCCTGTGGATGGTTTGCTGTTAATGCCAAAATATGAGATACGTTGGTCAATGGTGTTCATAGTGGCATGGAgcatcataatattattatatgtgaaGCTGTGGTATAGTCCTCAGAGAATCCGAAAAGTGCTTCAAAAGCAAGGCATCAATGGACCAAAGCCTTCCTTCCCCTTTGGAAACATTTCTGAGATGCAACAGGTCAATCAATTAGCTCCTGTTTCTCTTGAAGCCTTAGACGAATGGGCTTATTCCCTCTACCCATATTTCCATACATGGAGGCAACGCTATGGTAAAGTGTTCATGTACTCCACTGGAATCAAACAACATCTATATGTGGAGATACCGGAATTAGTAAAATGGATAGGTCTGAACAACTCCTTGGATCTAGGCCGGCCATTGCATTTATCCAAAACAATGAAGCCTTTGCTTGGTGACGGCATCCTAATGTCTAATGGACTACAGTGGGCCTTCCAAAGGAATCTGCTTGCTCCTGAGTTTTTTCAGAGCAAAATTAagAATTGGGTGGATATAATGGTAGAATCTACCATGGCAATTATCAAAAAATGGGAGAGTCATGTAACAGAAAGTGAAGGGGGGATTGCAGAGTTGGTGATTGATGGAGATGTGAAGGCTCTTACAGAGGATGTCAtttcaaaaacttgttttggtaCCTCTTATGCTCaaggaaatttaattttggCAAAACTGGCCACTAAGCAAGCGGTACTAGCAAAGCCTAGTATTCTATTTGGATTTCTAAACCTAAGCTTTCTTCCCACCAAGGAAAACAAAGAGCTACGGAAGTTGCAGAAAGAGGTGGAAACAATGATACTAAAAGTGATAAAAGACCGTGAAGCAGAAAACCAAAAGAGTAGCACACATTGGAATCAAAAGGATCTATTACAAATAATACTAGAAGGTGCTGCCAGTGCCACCACTGGCAGTAGTGGAAAGGGTATTTTCGGGCCCCAGTATAACATAAACCAGTTGATTCTAGACATGTGCAAAAATATGTACTTTGCAGGCTCTGAGAGCACTTCTCTTTCAATCACTTGGACGCTGCTACTACTTGCCTTACATCCTGACTGGCAACAACGTGTTAGATCTGAGATTATGGAGACCTACGATATCATGTTGCCTCATTCCTTTCATCACATGGACAAACTTCGCAACTTGAAAGCAGTTAAGAGTCTCCGTCTTTATGGGCCATCAACTATGGCCACAAGGGAAGTGTTGGCTGATGAGGTGAAGTTGGGGGAACATGTGCTGCCCAAAGGCATCAACGTGTGGCTGTTCACACTCGCATTGCACCGTGACCCTGATAACTGGGGACCAGATGCTAGGGAGTTCAAGCCAGAAAGGTTTGCTGGTGGTGTTTCTGCGGCCTGTAAGTATCCCCAAGCTTATATACCGTTTGGCCTCGGGAATCGAATTTGCCTGGGCCAAAACTTTGCCTTGCTAGAAATGAAGGAAGCACTGTGTCTTCTTCTCGCCAACTTCTCCTTTGCTGTTTCACCAAACTATCGCCATTGTCCTGTGGATGGTTTGCTGTTAATGCCAAAACATGGTATTTCAGAGAGAGAGACATGCTGGTCAGTGGTGTTCATAGCAGCATGGAGcattataatattgttatatgTGAAGCTGTGGTACAGGCCTCAAAGGATCCGATCAGTGCTTCAGAAACAAGGCATCAATGGACCAAAGCCTTCCTTCCTCTTTGGCAACACTTCTGAGATGCAACAGGCCCACCAAACTCCACCTGTTTCTCTTGAAGCCTTAGACGAATGGACTTCTTCCCTCTTCCCATATTTCCACACATGGAGGCAACGCTATGGTCCAGTGTTCCTGTACTCTACTGGAACCAGACAACATCTGTATGTGGGGATACCCGAATTAATAAAATGGATAGGTCTGAACAAGTCCTTGGATCTAGGCCGGGCATCGTATCTAACCAAAACATTGAAGCCTTTGCTGGGTAACGGTATCCTTAGGTCTAATGGACTGCAGTGGGCCTTCCAAAGGAATCTACTTGCTCCTGAGTTTTTCCAGAGCAAAATTAAGAATTGGGTGGATATAATGAAAGAATCTACCACGGCAATTATCAAAAAATGGGAGAGCCATATAACAGAAAGTGAAGGGGGGATTGCAGAGTTGGTGATTGATGGAGATATGAAGGCTCTTACAGCGGATGTCATTTCAAAAGCTTGTTTTGGTAGCACTTATGCTCAAGGCAATTTAATATTTGCAAAATTGGCCACTATGCAAACGGCACTAGCAAAGCCTAGTATTCTATTTGGATTTCTAGACCTAAGGTTTCTTCCCACCAAGGAAAACAAAGAGATATGTAAGTTGCAGAAAGATGTGGAAACAATGATACTAAAAGTGATAAAAGACCGTGAAGCAGAAAACCAAAAGGGTAGCACACATGGGAATCAAAGGGATCTATTACAAATAATACTAGAAGGTGCTGCCAGTGCCACCACTGATAGCAGTGGAAAGGGTATTTTTGGGCCCCGATATAACATAAACCAGTTGATTCTAGACATCTGCAAAAATGTATACTTTGCAGGCTCTGAGAGCACTTCTCTTACAATCATTTGGACGCTGCTACTACTTGCCTTACATCCTGACTGGCAACAACGTGTTAGATCTGAGATTATGGAGACCTACGATAACTTGTTGCCTCATTCCTTTCATGACATGGACAAACTTCGACAGCTGAAAGCACTGACAATGGTGATTCAAGAGAGTCTACGTCTTTATGGGCCTGCAGTTACAGCATCAAGGGAAGTGTTGGCTGAGATGAAATTAGGGGAACATGTGTTGCCTAAAGGCATCAACATATGGTTGTTCTTGCCCACATTGCACCGAGACCCTGATAACTGGGGACCAGATGCTAGGATGTTTGAGCCAGAAAGGTTTGTTGGTGGTGTTTCTGCAGCCTGCAAGTATCCCCAAGCTTATATACCATTTGGCCTCGGGAGTCGAATTTGCTTAGGCCAAAACTTTGCCCTGCTAGAAATCAAGGAAGTACTCTGCCTTCTTCTATCGAAATTCTCCTTTGCTGTTTCACCAAACTATCGCCATTGCCCTGTGTACAGAATGCTGTTGATGCCAAAATATGGTGTGAGGCTTCTTGTTAGCAAGGTTCATAAGACCAGGGCATAG 4722 0.4282 MEAEGQWQISERGICWSMVFMVAWSIIILLYVKLWYSPQRIRKVLQKQGINGPKPSFPFGNISEMQQVNQLAPVSLEALDEWAYSLYPYFHTWRQRYGPAFMYSTGIKQHLYVEIPELIKWIGLNKSLDLGRPKHLIKTLKPLLGDGILMSNGLQWAFQRNLLAPELFQSKIKNWVDIMVESTMAIIKKWKSHITESEGGIAELVIDGDLKALTADVISKACFGTSYAQGNLIFAKLATMQAILAKPSVLFGFINLRFLPTKENKELWKLQKEVETMILKVIKDREAENQKSSTHGNQKDLLQIILEGAASATTDGGRKGIFGPRYNINQLILDICKNIYFAGSESTALAIIWTLLLLALHPDWQQRVRSEIMETYDIMLPHSFHDMDKLRNLKALTMVIQESLRLYGPSTMATREVLADEVKLGEHVLPKGINVWLFTLALHRDPDNWGPDAREFKPERFAGGVSAACKYPQAYIPFGLGNRICLGQNFALLEMKEALCLLLANFSFAVSPNYRHCPVDGLLLMPKYEIRWSMVFIVAWSIIILLYVKLWYSPQRIRKVLQKQGINGPKPSFPFGNISEMQQVNQLAPVSLEALDEWAYSLYPYFHTWRQRYGKVFMYSTGIKQHLYVEIPELVKWIGLNNSLDLGRPLHLSKTMKPLLGDGILMSNGLQWAFQRNLLAPEFFQSKIKNWVDIMVESTMAIIKKWESHVTESEGGIAELVIDGDVKALTEDVISKTCFGTSYAQGNLILAKLATKQAVLAKPSILFGFLNLSFLPTKENKELRKLQKEVETMILKVIKDREAENQKSSTHWNQKDLLQIILEGAASATTGSSGKGIFGPQYNINQLILDMCKNMYFAGSESTSLSITWTLLLLALHPDWQQRVRSEIMETYDIMLPHSFHHMDKLRNLKAVKSLRLYGPSTMATREVLADEVKLGEHVLPKGINVWLFTLALHRDPDNWGPDAREFKPERFAGGVSAACKYPQAYIPFGLGNRICLGQNFALLEMKEALCLLLANFSFAVSPNYRHCPVDGLLLMPKHGISERETCWSVVFIAAWSIIILLYVKLWYRPQRIRSVLQKQGINGPKPSFLFGNTSEMQQAHQTPPVSLEALDEWTSSLFPYFHTWRQRYGPVFLYSTGTRQHLYVGIPELIKWIGLNKSLDLGRASYLTKTLKPLLGNGILRSNGLQWAFQRNLLAPEFFQSKIKNWVDIMKESTTAIIKKWESHITESEGGIAELVIDGDMKALTADVISKACFGSTYAQGNLIFAKLATMQTALAKPSILFGFLDLRFLPTKENKEICKLQKDVETMILKVIKDREAENQKGSTHGNQRDLLQIILEGAASATTDSSGKGIFGPRYNINQLILDICKNVYFAGSESTSLTIIWTLLLLALHPDWQQRVRSEIMETYDNLLPHSFHDMDKLRQLKALTMVIQESLRLYGPAVTASREVLAEMKLGEHVLPKGINIWLFLPTLHRDPDNWGPDARMFEPERFVGGVSAACKYPQAYIPFGLGSRICLGQNFALLEIKEVLCLLLSKFSFAVSPNYRHCPVYRMLLMPKYGVRLLVSKVHKTRA 1573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0912 1573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 989 998 IPR017972 GO:0005506|GO:0016705
Ssu3g0912 1573 PRINTS E-class P450 group I signature 1363 1380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS E-class P450 group I signature 1245 1263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS E-class P450 group I signature 1516 1539 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS E-class P450 group I signature 1126 1145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS E-class P450 group I signature 1383 1409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS E-class P450 group I signature 1506 1516 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 Gene3D Cytochrome P450 550 1046 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 Gene3D Cytochrome P450 1066 1572 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 Gene3D Cytochrome P450 34 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PANTHER CYTOCHROME P450 FAMILY MEMBER 529 1042 - -
Ssu3g0912 1573 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 528 - -
Ssu3g0912 1573 PANTHER CYTOCHROME P450 FAMILY MEMBER 1042 1563 - -
Ssu3g0912 1573 SUPERFAMILY Cytochrome P450 82 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 478 487 IPR017972 GO:0005506|GO:0016705
Ssu3g0912 1573 PANTHER CYTOCHROME P450 FAMILY PROTEIN 9 528 - -
Ssu3g0912 1573 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 1509 1518 IPR017972 GO:0005506|GO:0016705
Ssu3g0912 1573 PANTHER CYTOCHROME P450 FAMILY PROTEIN 529 1042 - -
Ssu3g0912 1573 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1042 1563 - -
Ssu3g0912 1573 Pfam Cytochrome P450 1118 1563 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 Pfam Cytochrome P450 87 532 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 Pfam Cytochrome P450 603 1039 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS P450 superfamily signature 858 875 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS P450 superfamily signature 1516 1527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS P450 superfamily signature 1507 1516 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 PRINTS P450 superfamily signature 1430 1441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 SUPERFAMILY Cytochrome P450 1084 1565 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0912 1573 SUPERFAMILY Cytochrome P450 598 1041 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0912 Ssu-Chr3 21790478 21825059 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0912 118 530 Cytochrome P450 AT5G24900 42.686 1.68e-110 355
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0912 - - gmx:100802008 942.184