Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0866 ATGGGTCCTGTTTCAACACTTCATGTCAATGAAGACATTAGCAAAGAGAAGAAGCAACCAagCCAAGACAGCTTTCCCTCTACCACACCACATGCTTACACAACCACCACAAGCATGCTTGGGCCTTCCTCTGATTTACTTGTTGGTGGAATTGACACAACATCAAACACGGTGGAATGGATCATGGCCGAACTACTACGCAATCCAGATAAATTAGCAAAAGCAAGAAAAGAGTTATCTCAAGCAATTGGCAAAGATGTAACACTTGAAGAATCACACATCTTAAAGTTGCCGTTCTTGCAAGCAGTAGTGAAGGAAACTCTTCGCTTACACCCACCAGGTCCATTTTTAATACCCCACAAGTGTGATGAGATGGTATGCATATTTGGCTTCAAGGTTCCTAAAAATGCACTAGTCTTGGTCAATGTATGGGCCATGGGACGAGACCCAACCATTTGGGAAGATCCAAAAATGTTTATGCCTGAAAGATTTTTGGGGCGTGAGATTGATTTTAAAGGTCATGATTTTGAGCTCATACCCTTTGGGGCAGGCAAAAGGATATGCCCAGGATTGCCATTAGCTCACAGGACAATGCATTTAATGGTAGCATCGCTTGTACACAACTTTGAATGGAAGGTAGCTGATGGATTAATGCCAGAATACATGAACATGAAGGAGCAATATGGGCTAAGCTTAAAAAGGGTTCAATCTCTTCGAGTTCAGGCTATTCCAatcaaacacaattaa 747 0.415 MGPVSTLHVNEDISKEKKQPSQDSFPSTTPHAYTTTTSMLGPSSDLLVGGIDTTSNTVEWIMAELLRNPDKLAKARKELSQAIGKDVTLEESHILKLPFLQAVVKETLRLHPPGPFLIPHKCDEMVCIFGFKVPKNALVLVNVWAMGRDPTIWEDPKMFMPERFLGREIDFKGHDFELIPFGAGKRICPGLPLAHRTMHLMVASLVHNFEWKVADGLMPEYMNMKEQYGLSLKRVQSLRVQAIPIKHN 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0866 248 SUPERFAMILY Cytochrome P450 33 244 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS P450 superfamily signature 49 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS P450 superfamily signature 188 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS P450 superfamily signature 102 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS P450 superfamily signature 179 188 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 MobiDBLite consensus disorder prediction 1 38 - -
Ssu3g0866 248 PRINTS E-class P450 group I signature 178 188 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS E-class P450 group I signature 188 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS E-class P450 group I signature 58 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS E-class P450 group I signature 101 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS E-class P450 group I signature 142 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PRINTS E-class P450 group I signature 38 55 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 32 246 - -
Ssu3g0866 248 Coils Coil 246 248 - -
Ssu3g0866 248 MobiDBLite consensus disorder prediction 20 38 - -
Ssu3g0866 248 PANTHER CYTOCHROME P450 FAMILY PROTEIN 32 246 - -
Ssu3g0866 248 Pfam Cytochrome P450 44 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0866 248 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 181 190 IPR017972 GO:0005506|GO:0016705
Ssu3g0866 248 Gene3D Cytochrome P450 10 246 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0866 Ssu-Chr3 21023238 21047175 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0866 45 246 Cytochrome P450 AT2G45550 53.465 3.85e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0866 - - gmx:100810526 361.303