Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0865 ATGGACTACCAAACAATACTTCTACTTATTACCTTTGTGAGTGCAACCATTCTCATCTTCATCTCTAGACTATTCAACCAAACCTCATCAGAATCTACAAAGCTTCCACCAGGGCCACGTCCATTTCCTATCATAGGAAACATCTTGAAACTTGGCACAAATCCGCACAAGGCAGTCACCAAACTCTCTAGAATTTATGGACCTGTTATGACTCTGAAATTAGGCAGCATAACCACCATAGTCATCTCCTCTCCTCAAGTAGCCAAACAAGTACTGCATGAAAATGGCCAACTCTTTTCTAGTAGGACAATCCCACATTCAGTCCGTATACATGACCATCACAGATATTCTATTGCCTGGCTTCCCCCATCACCTCAGTGGAGGAACCTTAGACGAGTTTGTGCTACAAAAATATTCTCTCCACAAGTGCTTGACTCCACTCAAATTCTTCGCCAACAAAAGGTTCATGAACTATTGGACTTCGTGAAAGAAAGATGCAAGAAAGGTGAGGTTGTGAATATTGGTGAGGCTGTCTTTACAACAATCCTTAGTTCCACTTCAACCACTTTCTTCTCTATGGATCTGTCTAATTCTACACCTGAAAAGTCTCATGAGTTCAAAAACATTATTCGGGGCACAATGGAAGAACTTGGAAGGCTTAATGTTGCAGACTTCTTTCCCATTCTTCGTCCACTTGACCCTCAACGTGTGCTTGCAAGGACGACcaattattttaagaagttGTTTAAGATTATTGATGGAATTATTGAAGACAGAATGTGTTCAAGAGAATTAAAAACTGACTCCAAGGTGTACCAGGATGTATTGGATTCACTTCTTAACAATATTGAAGAAACCGGTTCTCAATTGACTCGCAATCAGATGTTACATTTATTTCTGGATTTACTTGTTGCTGGGATTGACACAACATCAAGCACAGTGGAATGGATTATGGCAGAGCTACTACGCAACCCAGATAAATAG 984 0.4004 MDYQTILLLITFVSATILIFISRLFNQTSSESTKLPPGPRPFPIIGNILKLGTNPHKAVTKLSRIYGPVMTLKLGSITTIVISSPQVAKQVLHENGQLFSSRTIPHSVRIHDHHRYSIAWLPPSPQWRNLRRVCATKIFSPQVLDSTQILRQQKVHELLDFVKERCKKGEVVNIGEAVFTTILSSTSTTFFSMDLSNSTPEKSHEFKNIIRGTMEELGRLNVADFFPILRPLDPQRVLARTTNYFKKLFKIIDGIIEDRMCSRELKTDSKVYQDVLDSLLNNIEETGSQLTRNQMLHLFLDLLVAGIDTTSSTVEWIMAELLRNPDK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0865 327 SUPERFAMILY Cytochrome P450 33 326 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0865 327 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 327 - -
Ssu3g0865 327 Gene3D Cytochrome P450 21 327 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0865 327 PRINTS E-class P450 group I signature 314 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0865 327 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0865 327 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0865 327 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0865 327 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 327 - -
Ssu3g0865 327 Pfam Cytochrome P450 36 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0865 Ssu-Chr3 21011770 21013331 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0865 4 325 Cytochrome P450 AT2G45550 40.308 7.06e-84 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0865 - - gmx:100809461 514.227