Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0864 ATGAGAGTACCTGAACTGAAACAAAGTGATAGATCTCTGCCTGATGCGCTGCTGATGCGTTGGGGACTAGGAGCACGAACACAGAGCACTGGCCAGAGTGTTGCGTTGCTGGGAGTGGGTGGTTGGCTGGGAGCGACCAGCGATGGAGCATCTACGAGACTCCATGCCACAAAGCGGGAGATGCCGAGACGAGGAGGGGAGGCCAAACCGTCAGCCGTTGGCCCGTCAGCAGTGTTGTTGGGGCTACGCCGGCTGGCTGTGGGTAGGAGCAGCGATTTACTTGTTGCTGGGCTTGACACAACATCAAGCACAGTGGAGTGGATTATGGGAGAACTACTACGCAACCCAGATAAATTGGCAAAAGCAAGAAAAGAGTTATCTCAAGCAATTGACAAAGATGAATTACCTGAAGAACAACACATCTTAAAGTTGCCGTTCCTACGAGCAGTGGTGAAGGAAACTCTTTGCTTGCACCCACCAGGTCCATTTTTAATACCCCACAAGTGTGATGAAATGGTAAGCATATCTGGCTTCAAGGTGCCCAAAAATGCACAAGTCTTGGTCAATGTGTGGGCCATGGGACGAGACCCAACTATTTGGGAGAATCCAGAAATGTTTATCCCTGAAAGATTTTTGGAGCGTGAGAGTGATTTTAAAGGTCATGATTTTGAACTCATTCCTTTTGGGACAGGCAAAAGGATATGCCTAGGATTGTCATTAGCTCACAGGTCAATGCATTTAATGGTGGCATCCCTTGTGCATAACTTTGAATGGAAGCTAGCTTAA 786 0.4822 MRVPELKQSDRSLPDALLMRWGLGARTQSTGQSVALLGVGGWLGATSDGASTRLHATKREMPRRGGEAKPSAVGPSAVLLGLRRLAVGRSSDLLVAGLDTTSSTVEWIMGELLRNPDKLAKARKELSQAIDKDELPEEQHILKLPFLRAVVKETLCLHPPGPFLIPHKCDEMVSISGFKVPKNAQVLVNVWAMGRDPTIWENPEMFIPERFLERESDFKGHDFELIPFGTGKRICLGLSLAHRSMHLMVASLVHNFEWKLA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0864 261 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 228 237 IPR017972 GO:0005506|GO:0016705
Ssu3g0864 261 SUPERFAMILY Cytochrome P450 90 260 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS E-class P450 group I signature 189 213 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS E-class P450 group I signature 235 258 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS E-class P450 group I signature 85 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS E-class P450 group I signature 225 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS E-class P450 group I signature 148 166 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS E-class P450 group I signature 105 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PANTHER CYTOCHROME P450 FAMILY PROTEIN 91 261 - -
Ssu3g0864 261 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 91 261 - -
Ssu3g0864 261 Pfam Cytochrome P450 91 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 Gene3D Cytochrome P450 84 261 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS P450 superfamily signature 235 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS P450 superfamily signature 149 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS P450 superfamily signature 226 235 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0864 261 PRINTS P450 superfamily signature 96 113 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0864 Ssu-Chr3 20986923 20991121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0864 92 260 Cytochrome P450 AT1G33730 56.213 2.68e-66 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0864 - - gmx:100810526 305.064