Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0863 ATGACCAAATATTTTAAGAAGTTGTGTGAGATTATTGATGGGATTATTGAGGAAAGAATGTGTTctagattttcaaaaactgaCTCCAAGGAGTGCAAGGATGTGTTAGATTCACTTCTTGACATTATTGAAGAGACCAATTCTCAGTTGAACCGCCATGAGATGTTACATTTGTTTGCGGATTTATTTGTTGCTGGGATTGACACAACATCAGTCACGGTGGAATGGGTTATGGCAGAGCTACTGCATAACCcagataaattagaaaaagcaAGAAAAGAGTTATCTCAAACAATTGGCAAAGATGGAACACTAGAAGAACCACAAATCTTAAAGTTGCCTTTCTTAGGAGCAATGGTGAAGGAAACTTTTCGCTTGCACCCACCAATTCCACTTTTGGTACCCCGCAAGTGTGATGAAATGGTAAACATATCTGACTTCAAAGTGCCTAAAAATGCACAAATCTTTGTCAATGTGTGGGCCATGGGACGAGATCCAACCATTTGGGAGAATCCAAAAATGTTCATGCCTGAAAGATTTTTGGATTGTGACATTGATTTTAAAGGTCATGATTTTGAGCTTATACCCTTTGGGGCAGGCAAGAGGATATGTCCAGGATTGCCATTAGCCCATAGGACAGTGCATTTAATGGTGGCCTCTCTTCTACACAATTTTGAATGGAAGCTAGCTGATGGACTAATGCCAGAACATATGAACATGAAGGAACAATACATGTTAACCATAAAGAGGGTCCAACCTCTTCGAGTTCAAGCTATTTCAATCAAGCACggttaa 795 0.3786 MTKYFKKLCEIIDGIIEERMCSRFSKTDSKECKDVLDSLLDIIEETNSQLNRHEMLHLFADLFVAGIDTTSVTVEWVMAELLHNPDKLEKARKELSQTIGKDGTLEEPQILKLPFLGAMVKETFRLHPPIPLLVPRKCDEMVNISDFKVPKNAQIFVNVWAMGRDPTIWENPKMFMPERFLDCDIDFKGHDFELIPFGAGKRICPGLPLAHRTVHLMVASLLHNFEWKLADGLMPEHMNMKEQYMLTIKRVQPLRVQAISIKHG 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0863 264 Gene3D Cytochrome P450 1 262 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PANTHER CYTOCHROME P450 FAMILY PROTEIN 1 262 - -
Ssu3g0863 264 SUPERFAMILY Cytochrome P450 3 258 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 197 206 IPR017972 GO:0005506|GO:0016705
Ssu3g0863 264 Coils Coil 36 56 - -
Ssu3g0863 264 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 262 - -
Ssu3g0863 264 Pfam Cytochrome P450 3 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS E-class P450 group I signature 117 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS E-class P450 group I signature 74 100 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS E-class P450 group I signature 54 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS E-class P450 group I signature 158 182 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS E-class P450 group I signature 194 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS E-class P450 group I signature 204 227 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS P450 superfamily signature 118 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS P450 superfamily signature 204 215 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS P450 superfamily signature 195 204 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0863 264 PRINTS P450 superfamily signature 65 82 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0863 Ssu-Chr3 20957307 20959044 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0863 1 254 Cytochrome P450 AT1G33730 49.609 7.05e-92 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0863 - - gmx:100809461 427.172