Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0854 ATGGCCCCCAGATCACCGCCAATGGCGCCACCCATCGCGGCGCACCTCACGGCCTTCGCTCTCTTCGTCACCGTCGCCGCTGCCGCAACCGAATACCACAACCACACGGTCGGTGCAGCCGCCGGGTGGTTCTTCAACTCCACCACCGACACACCCGCCGCGAACTACTCTTCTTGGGCTTCAACTCAAACATTCGACCTTGGCGATTATCTCAttttcaacaCGAACTCGAACCAAACGGTGGTTCAGACTTACAACAAGACTACCTATCTGAACTGCACCGCCGACGAATCCGACAACGGCACCTTCGTGTACGACGGCGGAAGCGGTCGTTTCGGCGAGGCGTTGACCATCGCCGTGCCGTTGACCATAGTTGGACCGAACTACTTCTTCTCCGACGCCGGCGACGGCGTCCAGTGCCAGCGCGGCTTGGCCTTCGAGATCGACGTCCAGCGAGGCCTCGGCTTACCGCCGAGTCTCAACcagccgccgccgccgccgtaCCGGGAGCCGCCGGGTCCCGACTCCGCTCAGTCACCGCCGATCGCGGTGGCGCAGTCTCCCAGCGGCGGCGCTTTCGCGAGCCGCGCTGACGTGTGCATGGCGGGTTCTGGGCTTCGCTGCGGCGTTATTGCTGATGCAGCAGTTTCAGTGAGGAGTATGTTAGCTTACGGTGGGTGCGCAgcattggattttttttttttacagctCACAGTCACGGTCACAGTTCCCATGGACGACAAAATtcattga 753 0.5697 MAPRSPPMAPPIAAHLTAFALFVTVAAAATEYHNHTVGAAAGWFFNSTTDTPAANYSSWASTQTFDLGDYLIFNTNSNQTVVQTYNKTTYLNCTADESDNGTFVYDGGSGRFGEALTIAVPLTIVGPNYFFSDAGDGVQCQRGLAFEIDVQRGLGLPPSLNQPPPPPYREPPGPDSAQSPPIAVAQSPSGGAFASRADVCMAGSGLRCGVIADAAVSVRSMLAYGGCAALDFFFLQLTVTVTVPMDDKIH 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0854 250 SUPERFAMILY Cupredoxins 33 150 IPR008972 -
Ssu3g0854 250 Pfam Plastocyanin-like domain 48 143 IPR003245 GO:0009055
Ssu3g0854 250 Gene3D - 31 152 IPR008972 -
Ssu3g0854 250 MobiDBLite consensus disorder prediction 155 189 - -
Ssu3g0854 250 PANTHER OS12G0454600 PROTEIN 17 200 - -
Ssu3g0854 250 MobiDBLite consensus disorder prediction 158 178 - -
Ssu3g0854 250 ProSiteProfiles Phytocyanin domain profile. 33 152 IPR003245 GO:0009055
Ssu3g0854 250 CDD Phytocyanin 33 150 - -
Ssu3g0854 250 PANTHER BLUE COPPER PROTEIN 17 200 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0854 Ssu-Chr3 20813152 20814175 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0854 5 185 Phytocyanin Superfamily AT1G08500 38.919 4.02e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0854 - - ccaj:109802964 324.709