Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0847 ATGTTACTACTAAATATGTTTCTACAAAAACAGACAAAATCCTTTTCCCTTGTTTGGCTTCAATTATTGCTAATCTTGCCAAGCAGTTCTTCAGTTAATGGAAATGAGCAGAAGaacttttacattgtttttttGGGAGCTCATACAGAGAGCAGAGGCAATGCACTGGAGACCTATTTAAATGTTCTATCTGCTGTGAAGGGGAGCTACCCTGAAGCCAAAGAATCCATGGTATATAGCTACACAAAGAGCTTCAATGCATTTGCTGCAAAACTGTCAGAGGATGAAGCCAATAAGTTATCTGCCATGGATGAAGTGCTTTTAGTGTTTCGAAATCAGTACCGCCAGTTACATACAACAAGATCATGGAACTTCATTGGGTTACCTCCAACTGCTAAGAGAAGATTGAAATTAGAAAGTGACATAGTTGTTGCTCTTTTTGATACAGGGATCACGCCTGAGTCGAAAAGCTTCAAGGACGATGGATTTGGTCCTCCACCAGCAAGATGGAAAGGAAGTTGTGGCCACTTTGCTAATTTCTCAGGCTGCAATAAAAAGATAATAGGTGCCAAGTACTTCAAGGCTGATGGAAACCCTGATCCATCTGACATATTATCGCCTGTAGATGTTGATGGCCATGGCACTCACACTGCATCAACAGCTGCAGGCAATCTGGTCCCAAATGCAAGTCTCTTTGGGTTGGCCAATGGGACTGCTCGCGGTGCCGTGCCATCGGCGAGGTTGGCAATTTACAAAGTTTGCTGGTCAACTAGTGGATGTGCAGACATGGACATACTCGCTGCATTTGATGCTGCTATACATGATGGTGTGGATGTCATATCTATTTCCATAGGTGGAGGGGATCCTAATTATGTTGAAGACGGTATATCAGTTGGTGCTTTTCATGCCATGAGGAAAGGTATAATCACAGTGGCCTCAGCTGGAAATGGTGGTCCAACCATGGGAACTGTAACAAATACTGCACCATGGATTGTAACAGTAGCAGCTAGTGGCATTGACAGGGCCTTCAAGAGCACTGTACAGTTGGGAAATGGAAATAATGTTTCTGGGGTAGGAGTGAGTTGTTTcaatccaaaacaaaaacagTACCCCCTTGTCCGTGGGATTGATGCAGCCAAAGACTCAAAAGACAAGGACAGTGCTAGATTTTGCTATGAAGACTCCTTAGAACCAAAAAAAGTGAAGGGAAAGCTTGTTTATTGCAAATTAGGAACATGGGGCACTGAAGCTGTTGTGAAAGGAATTGGGGGCATTGGTACTTTAATAGAAAGTGACCAATATCCTGATGTTGCTCAAATTTTCATGGCACCTGCTACCATTGTGAATAGTGGCATAGGTGACACTATTACCAAATATATACAATCCACAAGATCACCATCAGCAGTAATATACAAGAGCCATGGAATGCAAATTCAAGCTCCATTTGTTGCTACCTTTTCATCTAGAGGCCCAAATCCAGGATCCCAAAATGTTCTCAAGCCTGATGTTGCAGCTCCTGGCATTGACATCTTGGCATCTTATACTCTTAAGAAGTCACTCACTGGTTTGAAAGGGGACACTCAATTTTCAGAATTTATTCTATTGTCTGGGACTTCCATGGCATGTCCTCATGTTGCTGGAGTAGCAGCATATGTGAAGTCATTTCACCCAAATTGGACTCCTGCTGCAATCAGGTCTGCTATTATCACCACAGCCAAACCTATGAGCAAGAGAGTTAACAATGAGGCAGAATTTGCCTATGGTTCTGGTCAATTGAACCCAACAAGAGCTGTGAGCCCTGGTTTGGTCTATGACATGGATGACTTTGGTTATATCCAGTTCTTATGCCATGAGGGGTACAATGGTTCCAGTTTATCAGCTTTAGTTGGTTCACCTGTAAATTGCTCCTCTTTGCTTCCTGGGCTTGGCCATGATGCTATCAACTACCCCACAATGCAATTGAGCCTAGAAAGCAACAAAGGCACAAGAGTAGGAGTTTTCAGAAGAACGGTGACCAATGTTGGTCCTGCTTCAACCATCTACAATGCCACCATTACCTCACCTAAGGGAGTGGAAATCACAGTGAAGCCAACTAGCCTCATTTTTTCTAAAACCCTGCAGAAGAGGAGCTTCAAAGTAGTTGTGAAAGCCACATCTATTGGAAGGAAGAAAATTGTATCAGGTTCCCTTATATGGAGAAGTCCACGTTACGTTGTAAGGAGTCCTATTGTTATCAACAATGCATAA 2247 0.4241 MLLLNMFLQKQTKSFSLVWLQLLLILPSSSSVNGNEQKNFYIVFLGAHTESRGNALETYLNVLSAVKGSYPEAKESMVYSYTKSFNAFAAKLSEDEANKLSAMDEVLLVFRNQYRQLHTTRSWNFIGLPPTAKRRLKLESDIVVALFDTGITPESKSFKDDGFGPPPARWKGSCGHFANFSGCNKKIIGAKYFKADGNPDPSDILSPVDVDGHGTHTASTAAGNLVPNASLFGLANGTARGAVPSARLAIYKVCWSTSGCADMDILAAFDAAIHDGVDVISISIGGGDPNYVEDGISVGAFHAMRKGIITVASAGNGGPTMGTVTNTAPWIVTVAASGIDRAFKSTVQLGNGNNVSGVGVSCFNPKQKQYPLVRGIDAAKDSKDKDSARFCYEDSLEPKKVKGKLVYCKLGTWGTEAVVKGIGGIGTLIESDQYPDVAQIFMAPATIVNSGIGDTITKYIQSTRSPSAVIYKSHGMQIQAPFVATFSSRGPNPGSQNVLKPDVAAPGIDILASYTLKKSLTGLKGDTQFSEFILLSGTSMACPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPMSKRVNNEAEFAYGSGQLNPTRAVSPGLVYDMDDFGYIQFLCHEGYNGSSLSALVGSPVNCSSLLPGLGHDAINYPTMQLSLESNKGTRVGVFRRTVTNVGPASTIYNATITSPKGVEITVKPTSLIFSKTLQKRSFKVVVKATSIGRKKIVSGSLIWRSPRYVVRSPIVINNA 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0847 748 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Ssu3g0847 748 Pfam Fibronectin type-III domain 647 745 IPR041469 -
Ssu3g0847 748 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 40 745 IPR045051 -
Ssu3g0847 748 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Ssu3g0847 748 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Ssu3g0847 748 PRINTS Subtilisin serine protease family (S8) signature 209 222 IPR015500 -
Ssu3g0847 748 Pfam Subtilase family 140 590 IPR000209 GO:0006508|GO:0008236
Ssu3g0847 748 Gene3D Peptidase S8/S53 domain 141 608 IPR036852 GO:0004252|GO:0006508
Ssu3g0847 748 Gene3D - 340 476 - -
Ssu3g0847 748 CDD PA_subtilisin_like 346 470 - -
Ssu3g0847 748 ProSiteProfiles Serine proteases, subtilase domain profile. 122 598 - -
Ssu3g0847 748 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 118 IPR037045 -
Ssu3g0847 748 SUPERFAMILY Subtilisin-like 121 598 IPR036852 GO:0004252|GO:0006508
Ssu3g0847 748 Gene3D - 615 747 - -
Ssu3g0847 748 Pfam Peptidase inhibitor I9 41 118 IPR010259 -
Ssu3g0847 748 CDD Peptidases_S8_3 116 572 IPR034197 -
Ssu3g0847 748 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.14 40 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0847 Ssu-Chr3 20627636 20635845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0847 25 586 Subtilisin-like Serine Gene Family AT4G00230 65.480 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0847 - - gmx:100795950 1322.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2684 4 68245841 68250038 Ssu3g0847 3 20627636 20635845 PCT