Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0824 ATGGATGCGGGGGATAGATTAAGTTCAACAGAACCACATGATTTGGCTGACAAAGCAACTGCAAGAATGGGAGCTGTTTCAAAAAAAAAAGAACTTCCATTGCGTTTGTATTTTGGGAATGGTCCAAGAATCCATGAGAAGCTGTGTACTGAGTATGGTGTGGTTAATAGACGTTGTGAACAATGTGGTAAAATTGGACAACTAACTTGCTTTTCACCAACCTTCCGAAAGTGGGCTTTAAGGAGAGTAACTGAAGAAGAGCTTAATCAAACATGCAGCGTATGTAATGAACGTGGACACAACTATCTTGACTGTGATCTTCGTATTGCTGCAGTTCCTGCTCCTAAAGAAAGGAGGCTGGTGCATTGTGGATTCTGTGGTGAAGCTGGACATAACCGACGAACATGTTTAAAAGCTAAACGTAACTAA 429 0.4126 MDAGDRLSSTEPHDLADKATARMGAVSKKKELPLRLYFGNGPRIHEKLCTEYGVVNRRCEQCGKIGQLTCFSPTFRKWALRRVTEEELNQTCSVCNERGHNYLDCDLRIAAVPAPKERRLVHCGFCGEAGHNRRTCLKAKRN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0824 142 Gene3D - 84 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0824 Ssu-Chr3 19778116 19781187 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0824 22 138 C2H2 Transcription Factor Family AT5G20220 28.571 4.33e-06 43.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0824 - K09250 gmx:102661142 226.098