Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0786 ATGGGTGATAGCTGTGAGAGAGGTGGGAGCAGTGGTGGCACCACCACAAGGCTCCTCCGGACAGCGGCGGAGGACGGTGGCTATTCGGAAAGGAAGAGTGAGAGGCCAAGAGAGCCTTGGAAAGGAGAATATGTAAAGAGCACAGTGTTTGCAGGGCTTGATGCCATTATCACTtgcttttctctcatttcctccATCTCTGCTAGCACTAGTTCCTCtgTGGGTGTGCTGGTTCTTGGCTTCTCAAACCTAGTGGCAGATGCAATATCAATGGGGTTTGGGGACTTTGTGTCAGCTAGCTCTGAGCAGGACGTTATCACTGAGGAAAGGAGAGTGACAGAATGGGATGTCATGAACCAAAGGGACAAAGAGCAGAGAGAGTTAGTCAAACACTATCAAGCACTTGGGATGGACAACAATGATGCAACCATGGTTGTGAGCATATTTACAAAGTACAATGGCATCCTGGTGGACCAGAGAATGGTAGCAGACAAAGGAATGCTGCCAGCAGACCAAGAAGTGAAGCCCTGGAAGAATGGCCTTGTCACCTTTGCATCCTTCATGCTCTTTGGCTCAACTCCTTTGCTCTCTTTCATCATCCTCATACCATTCACTGACAGTGACACTGTCAAGTTTGTTAGTGCTTGCCTTGTTTCTGCACTTGCGCTTGCTCTTCTTGGGTGGCAAAGGCAAGGATTGCTGGTCAAAACATTATGTTCTCTGTTGCTATGA 732 0.4699 MGDSCERGGSSGGTTTRLLRTAAEDGGYSERKSERPREPWKGEYVKSTVFAGLDAIITCFSLISSISASTSSSVGVLVLGFSNLVADAISMGFGDFVSASSEQDVITEERRVTEWDVMNQRDKEQRELVKHYQALGMDNNDATMVVSIFTKYNGILVDQRMVADKGMLPADQEVKPWKNGLVTFASFMLFGSTPLLSFIILIPFTDSDTVKFVSACLVSALALALLGWQRQGLLVKTLCSLLL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0786 243 MobiDBLite consensus disorder prediction 24 39 - -
Ssu3g0786 243 Pfam VIT family 46 231 IPR008217 GO:0005384|GO:0030026
Ssu3g0786 243 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 29 230 IPR008217 GO:0005384|GO:0030026
Ssu3g0786 243 MobiDBLite consensus disorder prediction 1 39 - -
Ssu3g0786 243 PANTHER CCC1 FAMILY PROTEIN-RELATED 29 230 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0786 41 114 Nodulin-like Gene Family AT3G25190 28.000 7.86e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0786 K22736 - gmx:100776858 345.51