Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0736 ATGGCGACTGATATGCAGAGGCTTGTTGGAACGAGTGAGGATGATGAAGAAATGGGAATGGACGTAAAAGatgaggatgatgatgatgacgactATGAGGAAAATGGAGGTGAGCAGGGAAATGCTCAAGCGATGTTAGAGATTGATGGTGGGAATGGGATAGGAACTGCCACTGGTGACAACAGGTTTCAGCAGCACCAGCAGTTTCAAGAGCAAGTAGGCACCCCAGGGGGAGGTAATCGAAGATCTAGGCCGctagaagagaaagagagaacaaagCTAAGAGAGAGGCGCCGGAGGGCTATCACTGCAAGGATCTTGGCAGGGCTTCGCAGGCATGGCAATTACAATCTAAGAGTTAGGGCTGACATAAACGATGTCATTGCTGCTCTAGCAAGGGAAGCTGGATGGGTGGTTCTTCCAGATGGCACTACTTTTCCCTCAAGATCTCAGTCTCAGGGTCAAAAGCCAGCTGGTGGAAATTCGACAATTGTCACTTCATCGTCTTCCCATGTGGCTTCACAACAGACCCCATCTGCTTCTCTCAGGGGAGTTGCTTCTGGCTATAGGAGCCCTTTAGAATATAATGCATGTCAAACGAAAGGTGTTTTTATGCCAACTCCGTCTCCTTATGATCTATCCTCAAGTTCCCGGTCTCAAACATCTATGGTGGGGGATGGAGAAGCACAAAGAGACAATCGTCCTCTGATTGGTGGTTCAATGGATAATGTTGATGAGAAGCAGATTGCTGACTTGCCCCCCAGATTACCAGAGCGTGATTTGGCTGGTACCCCCTATGTTCCAGTTTATGTGATGCTACCGTTAGGGGTGATCAATATTAAATGTGAGCTTGTGGATCCAGATGGTCTTCTAAAGCAGCTGAGGGTGTTGAAATCAGTACATGTTGATGGTGTTATGGTAGACTGTTGGTGGGGAATAGTGGAGGCGCATGCTCCACAAGAGTATAATTGGAATGGTTACAAGAGACTCTTTCAAATGGTGCGTGAGCTTAAGCTTAAGCTGCAGGTTATGATGTCATTTCATGAATGTGGAGGCAATTTTGGTGATGATGTTTGTATTCCATTACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTGACATTTTTTTCACCGATAGAGAGGGAAGACACAACCCTGAATGTCTTTCTTGGGGAATTGATAAGGAACGAGTTTTAAGAGGTCGGACTGCTGTGGAGGTTTACTTTGATTTCATGAGAAGTTTCCGGGTAGAGTTTGATGAGTATTTTGAGGATGGCTTAATCTCCATGATTGAAGTTGGACTGGGTCCATGTGGAGAGCTAAGATACCCATCTAGTCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGTGAATTCCAGTGCTATGATCAGTATATGTTGAAAAGTCTTAGGAAAGCAGCAGAAGTCAGGGGTCATGCTATTTGGGCTAGAGGGCCAGATAATGCTGGTACCTATAATTCTCAGCCACATGAAACAGGTTTCTTTTGTGATGGGGGTGATTATGATGGCTTCTATGGCAGGTTTTTTCTTAACTGGTACTCTCAGGTTTTAGTTGATCATGGAAATCGGGTACTTTCTCTGGCAAAATTAGCTTTCGAGGGATCCTGCATTGCTGCAAAGttATCGGGTATTTACTGGTGGTACAAGACTGCAAGTCATGCTGCTGAATTAACTGCTGGGTATTATAACCCTTGCAATCGTGATGGTTATACTGCAATTATGACAATGTTAAAGAGAAATGGAGTTAGCTTAAACATTCCTTGTGTTGACTTGCACTCATTGAACCGACATGAGGGCTTTCCAGAGACATTTGCAGATCCTGAGGGATTAGTCTGGCAAGTGTTGAATACTGGGTGGGATGTTGACCTACCAGTTACCAGTCAGAATGCATTTCCTTGCCTAAACAGAGTTAGCTATAACAAGGTTTTGGATAATGCCAAGCCCTTGAATGATCCAGATGGAAGGAACTTTTCATCCTTTACGTATCTGAGGCTTAGTCCACTTCTTATGGAACGGCAAAACTTCATAGAGTTTGAACGATTTGTCAAGAGAATGCATGGGGAAGCTGTTCTTGATCTTCAGGTATAA 2115 0.4359 MATDMQRLVGTSEDDEEMGMDVKDEDDDDDDYEENGGEQGNAQAMLEIDGGNGIGTATGDNRFQQHQQFQEQVGTPGGGNRRSRPLEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPSRSQSQGQKPAGGNSTIVTSSSSHVASQQTPSASLRGVASGYRSPLEYNACQTKGVFMPTPSPYDLSSSSRSQTSMVGDGEAQRDNRPLIGGSMDNVDEKQIADLPPRLPERDLAGTPYVPVYVMLPLGVINIKCELVDPDGLLKQLRVLKSVHVDGVMVDCWWGIVEAHAPQEYNWNGYKRLFQMVRELKLKLQVMMSFHECGGNFGDDVCIPLPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERVLRGRTAVEVYFDFMRSFRVEFDEYFEDGLISMIEVGLGPCGELRYPSSPVKHGWRYPGIGEFQCYDQYMLKSLRKAAEVRGHAIWARGPDNAGTYNSQPHETGFFCDGGDYDGFYGRFFLNWYSQVLVDHGNRVLSLAKLAFEGSCIAAKLSGIYWWYKTASHAAELTAGYYNPCNRDGYTAIMTMLKRNGVSLNIPCVDLHSLNRHEGFPETFADPEGLVWQVLNTGWDVDLPVTSQNAFPCLNRVSYNKVLDNAKPLNDPDGRNFSSFTYLRLSPLLMERQNFIEFERFVKRMHGEAVLDLQV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0736 704 MobiDBLite consensus disorder prediction 146 183 - -
Ssu3g0736 704 MobiDBLite consensus disorder prediction 17 36 - -
Ssu3g0736 704 MobiDBLite consensus disorder prediction 209 227 - -
Ssu3g0736 704 MobiDBLite consensus disorder prediction 1 43 - -
Ssu3g0736 704 PRINTS Plant beta-amylase signature 670 684 IPR001371 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Plant beta-amylase signature 685 699 IPR001371 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Plant beta-amylase signature 427 436 IPR001371 GO:0000272|GO:0016161
Ssu3g0736 704 Pfam Glycosyl hydrolase family 14 270 689 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 Pfam BES1/BZR1 plant transcription factor, N-terminal 79 220 IPR008540 -
Ssu3g0736 704 MobiDBLite consensus disorder prediction 70 96 - -
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 301 315 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 579 602 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 322 340 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 437 459 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 344 365 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 510 529 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 544 560 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 619 641 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 561 572 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 MobiDBLite consensus disorder prediction 206 241 - -
Ssu3g0736 704 PANTHER - 76 704 IPR001554 GO:0000272|GO:0016161
Ssu3g0736 704 PANTHER BETA-AMYLASE 76 704 - -
Ssu3g0736 704 Gene3D Glycosidases 258 703 - -
Ssu3g0736 704 MobiDBLite consensus disorder prediction 82 96 - -
Ssu3g0736 704 SUPERFAMILY (Trans)glycosidases 263 700 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0736 Ssu-Chr3 17764629 17770358 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0736 1 701 Glycoside Hydrolase AT2G45880 65.297 0.0 945
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Ssu3g0736 Glyco_hydro_14 1.3e-101 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0736 K01177 - gmx:100805560 1273.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0736 3 17764629 17770358 Ssu3g0736 3 17764629 17770358 ECH