Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0733 ATGTCTTTATTTGCTAGAAGTGTTTCCATACTATGGGCGCTTATGCTTTTTTGGTTGTCGAGGAACAATGCTGTGGCAGCAACGACGGTGAACCAGCTCCATATTTTAGTCACAAATTCTTTGTATGGAAATTTGAACTTAACCGTTTCTTGCAACAATATTGATCCTGCACACCACTTTCTCCGTCCTGTTACTTACCATGAATGGATTTATTCTGGTGATATTTCACGAAGCAAGCCACAATTCCTTTGTTCCTTTCAATGGCAAGGTGCCTCTCACTCGTTTAATATGTATGATCCAATATCGGAGTTAGATTGCAAAAAGTGCCATTGGTATATAAAACAAGATGGACCATGTAGGTGGTATTTCGTGAGCACTTATCGTTGCGCTAAAtggaactaa 402 0.3881 MSLFARSVSILWALMLFWLSRNNAVAATTVNQLHILVTNSLYGNLNLTVSCNNIDPAHHFLRPVTYHEWIYSGDISRSKPQFLCSFQWQGASHSFNMYDPISELDCKKCHWYIKQDGPCRWYFVSTYRCAKWN 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0733 133 PANTHER S-PROTEIN HOMOLOG 18-RELATED 23 132 - -
Ssu3g0733 133 Pfam Plant self-incompatibility protein S1 34 131 IPR010264 -
Ssu3g0733 133 PANTHER - 23 132 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0733 Ssu-Chr3 17676171 17676572 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0733 82 120 Carbohydrate Esterase AT3G16970 36.364 7.74e-06 41.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0733 - - ccaj:109802718 166.777