Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0732 ATGTCTTTATTTGCTAGAAATGTGTCCATACTGTGGGTGCTTATGCTTTTTTTGTCGTCGGCAAATAATGTTATGGCAGTGACAACAGTGGACCAGCTCCTTATTGAGGCCACAAATTCTTTGGATGGAAATTTGGACTTAACCATTTCTTGCAACAATATTGATCCTGCACACCACCTTCTCCGCCCTGGTACTTACCATGAATGGATTTATTCTGGTGATATTCCATCAAGCAAGCCACCATTCCTTTGTTCCTTTCAATGGCAAGGTGCCTCTCACTTGTTTAATATGTACGATCCAAGGCAGGATTTTGATTGCGAAGAGTGCCATTGGTATATAAAACAAAGTGGACCATGTAGGTGGTATTCCGGTACCACGCGCACTTATCGTTGCTCTAaatggaattaa 408 0.4118 MSLFARNVSILWVLMLFLSSANNVMAVTTVDQLLIEATNSLDGNLDLTISCNNIDPAHHLLRPGTYHEWIYSGDIPSSKPPFLCSFQWQGASHLFNMYDPRQDFDCEECHWYIKQSGPCRWYSGTTRTYRCSKWN 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0732 135 PANTHER - 23 134 IPR010264 -
Ssu3g0732 135 Pfam Plant self-incompatibility protein S1 36 134 IPR010264 -
Ssu3g0732 135 PANTHER S-PROTEIN HOMOLOG 18-RELATED 23 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0732 Ssu-Chr3 17638571 17638978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0732 82 135 Carbohydrate Esterase AT3G16970 32.203 3.36e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0732 - - ccaj:109802718 172.94