Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0724 ATGTCTCTGTATAccaaaagttttcttttactGTTCGTGTTCATGTTGCTATCGGCGAGCAATGTTCTTGGAAAAACGCATGTGTCTATTACGAATCATTTGGACAGAAAACAAGATCTAGTTGTTCACTGCAGATCGGCAGATGATGATCTTGGAGTGCATTCTCTCCATTTTAATCAAACCTTTGGATGGAGATTTGGGATTAGCATCTTTAGTGACACACAATTCTATTGTTCTTTTCGATGGAAAAATGCTCCTTTAGTATGGTATGATGTATACATTAAATCTAGGGATAAGCCAATATGTGACGAGTGCAATTGGTATATTAGAGAAGGTGGGCCATGTTCGTTACAAATTTATGAGATATTGAATGTGgGTTGCTAA 384 0.3542 MSLYTKSFLLLFVFMLLSASNVLGKTHVSITNHLDRKQDLVVHCRSADDDLGVHSLHFNQTFGWRFGISIFSDTQFYCSFRWKNAPLVWYDVYIKSRDKPICDECNWYIREGGPCSLQIYEILNVGC 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0724 127 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 17 117 - -
Ssu3g0724 127 PANTHER - 17 117 IPR010264 -
Ssu3g0724 127 Pfam Plant self-incompatibility protein S1 27 117 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0724 Ssu-Chr3 17465400 17467404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0724 25 118 Carbohydrate Esterase AT3G16970 39.796 2.51e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0724 - - cam:101515016 119.012