Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu3g0672 | ATGGAAAGCCAAGACCCACCAAACCCACCACCCCCTCCATTAATGTTTCCACCCCAAAACAACAACCCCTTCCTCTTCACGCCTTCGGTGTTGCAAAACCCTTTGGATCCTCAAGAGCAAGGCCTATGTGACATTGATTGGGGTAACCTTTTCTCTGCCCAAAACAGCTTATTGCTTAACGGGGATGCCAAGGACACTATTGAATGCGCTTCTTCGTCTTCTCTCGTGGCTGAAAGTAAAGGAGCTCGTGAGGAGGAAAAGGGAAACAAGGAGAAAAGGAGAGCGGGGAGGATGAAGAAAACAACACGAGTGCCAAGGTTTGCGTTTCAAACGAGAAGTGCAGATGATATTTTGGATGATGGTTATCGCTGGAGGAAATATGGGCAGAAAGCTGTGAAGAATAGCACATATCCAagAAGCTACTACCGCTGCACGCATCACACATGCAATGTGAAGAAACAAGTGCAAAGGCTATCCAAAGACACAAGCATCGTGGTGACGACTTACGAGGGAATTCACAACCACCCATGCGAGAAGCTGATGGAAACTCTAACCCCACTTCTGAAGCAAATACAGTTTCTTGCTAGCTTGTAA | 594 | 0.468 | MESQDPPNPPPPPLMFPPQNNNPFLFTPSVLQNPLDPQEQGLCDIDWGNLFSAQNSLLLNGDAKDTIECASSSSLVAESKGAREEEKGNKEKRRAGRMKKTTRVPRFAFQTRSADDILDDGYRWRKYGQKAVKNSTYPRSYYRCTHHTCNVKKQVQRLSKDTSIVVTTYEGIHNHPCEKLMETLTPLLKQIQFLASL | 197 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu3g0672 | 197 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
Ssu3g0672 | 197 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Ssu3g0672 | 197 | Gene3D | WRKY domain | 103 | 177 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu3g0672 | 197 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 39 | 193 | IPR044810 | GO:0003700 | |
Ssu3g0672 | 197 | SUPERFAMILY | WRKY DNA-binding domain | 111 | 177 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu3g0672 | 197 | ProSiteProfiles | WRKY domain profile. | 113 | 178 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu3g0672 | 197 | Pfam | WRKY DNA -binding domain | 119 | 176 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Ssu3g0672 | 197 | PANTHER | WRKY TRANSCRIPTION FACTOR 43-RELATED | 39 | 193 | - | - | |
Ssu3g0672 | 197 | MobiDBLite | consensus disorder prediction | 73 | 101 | - | - | |
Ssu3g0672 | 197 | SMART | WRKY_cls | 118 | 177 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu3g0672 | Ssu-Chr3 | 16107786 | 16109295 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu3g0672 | 91 | 197 | WRKY Transcription Factor Family | AT5G41570 | 71.963 | 2.84e-57 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Ssu3g0672 | WRKY | 2.1e-25 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu3g0672 | - | - | gmx:100796481 | 328.946 |