Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0663 ATGAACTCAGCTAGAGACGTTGAGGGTCATGGAACTCACACATCATCAACAGTTGCAGGAAACTATGTTAGTGGAGCCTCTTACTTTGGCTATGCTAAAGGGGTGGCTAGGGGCATTGCACCAAGGGCTAGGCTTGCCATGTACAAGGTCGTCTGGGAAGAGGGTTGTGTAGCCTCTGATGTTTTAGCTGGAATGGACCAAGCCATTGCTGATGGAGTTGATGTAATTTCCATCTCCATGGGGTTTGATGGTGTTCCACTTTATGAGGACCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCTTCTGCAGGTAATGACGGTCCTCATCTTGGTACCTTGCACAATGGAATCCCCTGGCTTCTGACCGTGGCTGCAGGCACCATAGACCGCACATTTGGTACTCTACTTCTTGGAAATGGCCAAACCATTATTGGTTGGACCTTGTTTCCAGCAAATGCCTTGATGGAAAATCTTCCACTTATCTACAATAAGAATATATCAGCATGTAACTCAGTCAAGCTGTTATCCGAAGTGGCCACAGAAGGAATCATTCTATGTGACTCAGTGTCAGACCCTGAGTTAATGTCTAAGCAAATGTGGCTCGTTAATGAAGCCAGTTTGTTAGGGGCAGTGTTTATCTCTGATTCTcctttattaaatgaaatagaaaCTGCCAGCTCTCCAAGTATTGTAATCAGTGCACAGGATGCACCATCTGTGATCAAGTATGCAAAAAGCCATGAGAAGCCAACAGCCAGCATCAAATTTCAACAAACATTTGTTGGAATAAAGCCAGCACCAGCTGTTACCTTTTACTCTTCAAGAGGTCCTTCACCTAGCTATCCTGGAGTCTTAAAGCCTGACATAATGGCACCAGGCTCTAATGTTCTTGCTGCTTTCATTCCTCATACACGAGCAGCTACAATTGGCATCAATGTGATCTTACCTAGTGACTACAATTTGCTGTCTGGAACATCCATGGCCTGCCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACCCACAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTAGATAATACCCAAAATCCAATTAGGGACTATGGTTACCCTTCTCAATATGCTTCCCCTCTTGCCATTGGAGCTGGTCAAATTGACCCTAACAAAGCACTTGATCCAGGTTTGATTTATGATGCCACCCCACAGGACTATGTTAATCTCCTCTGTGCTTTGAAGTATACACAAAAACAAATCTTAATCATTACAAGATCAACCTCTTACAACTGTGCAAAACCATCGTTTGATCTTAATTACCCTTCATTTATAGCTTTCTACAGCAACAAGACAAGGTCAGTTGTGCACAAGTTTAGGAGGACAGTGACCAATGTTGGAGATGGTGCTGCCACATACAGAGCCAAGGTGACACAACCTAAGGGCTCTGTGGTGACAGTGTCACCTAAGACGTTAGCATTCAGATATAAAAATGAGAAGATGAGCTACGATGTTATGATAGAGTATGGCAAGTACAAGAAGGAAAATATCACATTTGGGGATCTTGTTTGGATTGAAGATGGTGGAGCACATAGTGTTAGGAGCCCCATTGTAGTAGCACCAAGTGGAATTGTATGA 1662 0.4356 MNSARDVEGHGTHTSSTVAGNYVSGASYFGYAKGVARGIAPRARLAMYKVVWEEGCVASDVLAGMDQAIADGVDVISISMGFDGVPLYEDPIAIASFAAMEKGVVVSSSAGNDGPHLGTLHNGIPWLLTVAAGTIDRTFGTLLLGNGQTIIGWTLFPANALMENLPLIYNKNISACNSVKLLSEVATEGIILCDSVSDPELMSKQMWLVNEASLLGAVFISDSPLLNEIETASSPSIVISAQDAPSVIKYAKSHEKPTASIKFQQTFVGIKPAPAVTFYSSRGPSPSYPGVLKPDIMAPGSNVLAAFIPHTRAATIGINVILPSDYNLLSGTSMACPHASGVAALLKAAHPQWSAAAIRSALVTTASPLDNTQNPIRDYGYPSQYASPLAIGAGQIDPNKALDPGLIYDATPQDYVNLLCALKYTQKQILIITRSTSYNCAKPSFDLNYPSFIAFYSNKTRSVVHKFRRTVTNVGDGAATYRAKVTQPKGSVVTVSPKTLAFRYKNEKMSYDVMIEYGKYKKENITFGDLVWIEDGGAHSVRSPIVVAPSGIV 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0663 553 Gene3D - 419 549 - -
Ssu3g0663 553 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 548 IPR045051 -
Ssu3g0663 553 ProSitePatterns Serine proteases, subtilase family, serine active site. 331 341 IPR023828 -
Ssu3g0663 553 CDD PA_subtilisin_like 141 261 - -
Ssu3g0663 553 Pfam Subtilase family 2 378 IPR000209 GO:0006508|GO:0008236
Ssu3g0663 553 Pfam Fibronectin type-III domain 446 547 IPR041469 -
Ssu3g0663 553 PANTHER OS01G0868800 PROTEIN 3 548 - -
Ssu3g0663 553 Gene3D Peptidase S8/S53 domain 2 415 IPR036852 GO:0004252|GO:0006508
Ssu3g0663 553 PRINTS Subtilisin serine protease family (S8) signature 330 346 IPR015500 -
Ssu3g0663 553 PRINTS Subtilisin serine protease family (S8) signature 6 19 IPR015500 -
Ssu3g0663 553 ProSiteProfiles Serine proteases, subtilase domain profile. 1 402 - -
Ssu3g0663 553 SUPERFAMILY Subtilisin-like 2 406 IPR036852 GO:0004252|GO:0006508
Ssu3g0663 553 Gene3D - 136 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0663 Ssu-Chr3 15895773 15897434 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0663 2 550 Subtilisin-like Serine Gene Family AT5G67090 44.227 5.24e-138 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0663 - - gmx:100779169 974.156