Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0660 ATGTACAAGGTCGTTTGGGAAGAGGGTCGTTTAGCCTCTGACGTTTTGGCTGGAATGGACCAAGCCATTGCTGATGAGGTTGATGTGATTTCCATCTCCATGGGGTTTGATGGTGTTCCACTTTATGAGGACCCTATAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCTTCTGCAGGTAATGACGGTCCTCATCTTGGTACCTTGCACAATGGAATCCCCTGGCTTCTGACCGTGGCTGCAGGCACCATAGACCGCACATTTGGTGTTCTAATTCTTGGAAATGGCCAAACCATTATTGGTTGGACCTTGTTTCCAGCAAATGCATTGGTGGAAAATCTTCCACTTATCTACAACAAGAATACATCAGCATGTAACTCAGTCGAGCTGTTATCCAAAGTGGCCACAAAAGGGATCATTATATGTGACTCAGTGTCAGACCCTGAGTTAATGTTTAAGCAAAAGAGGTTTGTTAATGAAGCCAGTTTGTTAGGGGCAGTGTTTATCTCTGATGCTCCTTTATTAAATGACACAGGACCTGTCATATCTCCAAGTATTGTAATCAGTGCACAGGATGCACCATCAGTCATCAAGTATGCAAAAAGCCATGAAAAGCCAACAGCCAGCATCAAATTTCAACAAACATTTGTTGGGATAAAGCCAGCACCAGCTGCAGCCTTTGACACTTCAAGAGGTCCTTCACCTAGCTATCCTGGAGTCTTAAAGCCTGACATAATGGCACCAGGCTCTAATGTTCTTGCTGCTTTCATTCCTCATACAGGAGCAGCTACAATTGGCACCAATGTGATCTTACCTAGTGACTACAATTTGCTGTCTGGAACATCCATGGCCTGCCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACCCACAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTAGATAATACCCAAAATCCAATTAGGGACTATGGTTACCCTTTTCAATATGCTTCCCCTCTTGCCATTGGAGCTGGTCAAATTGACCCTAACAAAGCACTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTATGTTAATCTCCTTTGTGCTTTGAAGTACACACAAAAACAAATCTTAACCATTACAAGATCAACCTCCTACAACTGTGCAAAACCATCGTTTGATCTTAATTACCCTTCATTTATAGCTTTATACAGCAATAAAACAGGGTCAGTTGTGCACAAGTTTAGGAGAACAGTGACCAATGTTGGAGGCGGTGCTGCCACATACAGAGCCAAAGTGACACAACCTAAAGGCTCTGTGGTGACAGTGTCACCTGGGACACTagcattcaaatataaaaatgagaagCTGAGCTACGatgttatgataaaatatagCAAGTACAAGAAGGAAAATATCTCATATGGGGATCTTGTTTGGATTGAAGATGGTGGAGCACAGAGTGTTAGGAGCCCGATTGTAGTGGCACCAAGTGGAATTGTATGA 1524 0.4291 MYKVVWEEGRLASDVLAGMDQAIADEVDVISISMGFDGVPLYEDPIAIASFAAMEKGVVVSSSAGNDGPHLGTLHNGIPWLLTVAAGTIDRTFGVLILGNGQTIIGWTLFPANALVENLPLIYNKNTSACNSVELLSKVATKGIIICDSVSDPELMFKQKRFVNEASLLGAVFISDAPLLNDTGPVISPSIVISAQDAPSVIKYAKSHEKPTASIKFQQTFVGIKPAPAAAFDTSRGPSPSYPGVLKPDIMAPGSNVLAAFIPHTGAATIGTNVILPSDYNLLSGTSMACPHASGVAALLKAAHPQWSAAAIRSALVTTASPLDNTQNPIRDYGYPFQYASPLAIGAGQIDPNKALDPGLIYDATPQDYVNLLCALKYTQKQILTITRSTSYNCAKPSFDLNYPSFIALYSNKTGSVVHKFRRTVTNVGGGAATYRAKVTQPKGSVVTVSPGTLAFKYKNEKLSYDVMIKYSKYKKENISYGDLVWIEDGGAQSVRSPIVVAPSGIV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0660 507 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 502 IPR045051 -
Ssu3g0660 507 ProSitePatterns Serine proteases, subtilase family, serine active site. 285 295 IPR023828 -
Ssu3g0660 507 Gene3D Peptidase S8/S53 domain 1 357 IPR036852 GO:0004252|GO:0006508
Ssu3g0660 507 Gene3D - 93 221 - -
Ssu3g0660 507 Gene3D - 373 503 - -
Ssu3g0660 507 ProSiteProfiles Serine proteases, subtilase domain profile. 1 356 - -
Ssu3g0660 507 PANTHER OS01G0868800 PROTEIN 1 502 - -
Ssu3g0660 507 Pfam Subtilase family 2 332 IPR000209 GO:0006508|GO:0008236
Ssu3g0660 507 SUPERFAMILY Subtilisin-like 1 360 IPR036852 GO:0004252|GO:0006508
Ssu3g0660 507 CDD PA_subtilisin_like 95 215 - -
Ssu3g0660 507 Pfam Fibronectin type-III domain 400 501 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0660 Ssu-Chr3 15830383 15831906 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0660 1 504 Subtilisin-like Serine Gene Family AT5G67090 42.553 4.59e-113 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0660 - - gmx:100779169 880.167