Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0659 ATGGAGCCTAAGCCTAAGTTTGTGTTTCCACTTCCATTCATGCTCCTCATTACTCACTGGTTTCTATTGGCTCTTAATGCCAGTTCCGAGAGTTCCACATATATAGTCCACATGGACAAATCCCTCTTTCCTCATGTTTTCACAACCCATCATGATTGGTTTGAATCCACCATTGATTCCATAAAATCACCAACACTTGGTCACTCATCCAAACAAACACAGAAGCTAGTGTACTCCTATAACCACGCCATGTATGGCTTTAGTGCCGTACTATCTTCAGAAGAGTTAGAGGCTGTTAAGAACTCCCATGGCTTTGTTGCAGCATATCCAGACAGAACTGCCACCATAGACACCACTCACACTTTTCAGTTTCTCTCCCTAGACTCTTCCAGTGGCCTATGGCATGCCTCAAATTTTGGGGAGGATGTCATTGTGGGTATGATTGACTCTGGTGTGTGGCCTGAGAGTGAAAGCTTTAAAGATGATGGCATGACCAAGAAAATTCCAAACAGGTGGAAAGGGACCTGTGAGGAAGGGCAAGACTTCAACACTTCCATGTGCAACTTCAAACTGATTGGAGCTAGATATTTCAACAAGGGTGTGATTGCTGCCAATTCCAAGGTTAGAATCAGTATGAACTCAGCTAGAGACACTCGGGGTCATGGAACTCACACATCTTCAACAGTTGCAGGAAACTATGTTGGTGGAGCCTCTTACTTTGGCTATGCTAAAGGGGTGGCTAGAGGCATTGCACCAAGGGCTAGGCTTGCCATGTACAAGGTCGTTTGGGAAGAGGGTCGTGTAGCCTCTGATGTGTTGGCTGGAATGGACCAAGCCATTGCCGATGGGGTTGATGTGATTTCCATCTCCATGGGGTTTGATGGTGTTCCACTTTATGAGGACCCTGTAGCAATAGCTTCTTTTGCAGCAATGGAAAAAGGGGTGGTGGTTTCATCTTCTGCAGGTAATGACGGTCCTCATCTTGGTACTTTGCACAATGGAATCCCCTGGCTTCTGACCGTGGCTGCAGGCACCATAGACCGCATATTTGGTACTCTTATTCTTGGAAATGGCCAAACCATTATTGGTTGGACCTTGTTTCCAGCAAATGCATTGGTGGAAAATCTTCCACTTATCTACAACAAGAATACATCAGCATGTAACTCAATCGAGCTGTTATCCAAAGTGGCCACAAAAGGGATCATTATATGTGACTCAGTGTCAGACCCTGAGTTAATGTTTAAGCAAAAGAGGTTTGTTAATGAAGCCAGTTTGTTAGGGGCAGTGTTTATCTCTGATGCTCCTTTATTAAATGACACAGGACCTGTCATATCTCCAAGTATTGTAATCAGTGCACAGGATGCACCATCAGTCATCAAGTATGCAAAAAGCCATGAGAAGCCAACAGCCAGCATCAAATTTCAACAAACATTTGTTGGGATAAAGCCAGCACCAGCTGCAGCCTCTTACACTTCAAGAGGTCCTTCACCTAGCTATCCTGCAGTCTTAAAGCCTGACATAATGGCACCAGGCTCTGATGTTCTTGCTGCTTTCATTCCTCATAGGAGAGCAGCTACAATTGGCACCAATGTGATCTTATCTAGTGACTACAATTTGCTGTCTGGAACATCCATGGCTTGCCCTCATGCTTCTGGTGTTGCTGCTCTTTTGAAAGCTGCACACCCACAATGGAGTGCTGCTGCTATAAGGTCTGCACTAGTAACCACAGCTAGTCCTCTAGATAATACCCAAAATCCAATTAGGGACTATGGTTACCCTTCTCAATATGCTTCCCCTCTTGCCATTGGAGCTGGTCAAATTGACCCTAACAAAGCACTTGATCCAGGTTTGATATATGATGCCACCCCACAGGACTATGTTAATCTCCTTTGTGCTTTGAAGTACACACAAAAACAAATCTTAACCATTACAAGATCAACCTCCTACAACTGTGCAAAACCATCGTTTGATCTTAATTACCCTTCATTTATAGCTTTCTACAGCAACAAAACAAGGTCAGTTGTGCACAAGTTTAGGAGGACAGTGACCAATGTTGGAGGTGGTGCTGCCACATACAGAGCCAAGGTGACACAACCTAAGGGCTCTGTGGTGACAGTGTCACCTGAGACACTAGCATTCAAATATAAAGATGAGAAGCTGAGCTACGatgttatgataaaatatagCAAGTACAAGAAGGAAAATATCTCGTATGGGGATCTTGTTTGGATTGAAGATGGTGGAGCACAGAGTGTTAGGAGCCCGATTGTAGTGGCACCAAGTGGAATTGTATGA 2295 0.4418 MEPKPKFVFPLPFMLLITHWFLLALNASSESSTYIVHMDKSLFPHVFTTHHDWFESTIDSIKSPTLGHSSKQTQKLVYSYNHAMYGFSAVLSSEELEAVKNSHGFVAAYPDRTATIDTTHTFQFLSLDSSSGLWHASNFGEDVIVGMIDSGVWPESESFKDDGMTKKIPNRWKGTCEEGQDFNTSMCNFKLIGARYFNKGVIAANSKVRISMNSARDTRGHGTHTSSTVAGNYVGGASYFGYAKGVARGIAPRARLAMYKVVWEEGRVASDVLAGMDQAIADGVDVISISMGFDGVPLYEDPVAIASFAAMEKGVVVSSSAGNDGPHLGTLHNGIPWLLTVAAGTIDRIFGTLILGNGQTIIGWTLFPANALVENLPLIYNKNTSACNSIELLSKVATKGIIICDSVSDPELMFKQKRFVNEASLLGAVFISDAPLLNDTGPVISPSIVISAQDAPSVIKYAKSHEKPTASIKFQQTFVGIKPAPAAASYTSRGPSPSYPAVLKPDIMAPGSDVLAAFIPHRRAATIGTNVILSSDYNLLSGTSMACPHASGVAALLKAAHPQWSAAAIRSALVTTASPLDNTQNPIRDYGYPSQYASPLAIGAGQIDPNKALDPGLIYDATPQDYVNLLCALKYTQKQILTITRSTSYNCAKPSFDLNYPSFIAFYSNKTRSVVHKFRRTVTNVGGGAATYRAKVTQPKGSVVTVSPETLAFKYKDEKLSYDVMIKYSKYKKENISYGDLVWIEDGGAQSVRSPIVVAPSGIV 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0659 764 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Ssu3g0659 764 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Ssu3g0659 764 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Ssu3g0659 764 SUPERFAMILY Subtilisin-like 117 617 IPR036852 GO:0004252|GO:0006508
Ssu3g0659 764 CDD PA_subtilisin_like 352 472 - -
Ssu3g0659 764 Gene3D Peptidase S8/S53 domain 142 626 IPR036852 GO:0004252|GO:0006508
Ssu3g0659 764 CDD Peptidases_S8_3 115 578 IPR034197 -
Ssu3g0659 764 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Ssu3g0659 764 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 759 IPR045051 -
Ssu3g0659 764 PANTHER OS01G0868800 PROTEIN 33 759 - -
Ssu3g0659 764 ProSiteProfiles Serine proteases, subtilase domain profile. 121 613 - -
Ssu3g0659 764 Pfam Fibronectin type-III domain 657 758 IPR041469 -
Ssu3g0659 764 Gene3D - 347 479 - -
Ssu3g0659 764 Gene3D - 630 760 - -
Ssu3g0659 764 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 116 IPR037045 -
Ssu3g0659 764 Pfam Peptidase inhibitor I9 33 114 IPR010259 -
Ssu3g0659 764 Pfam Subtilase family 140 589 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0659 Ssu-Chr3 15809545 15811839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0659 14 761 Subtilisin-like Serine Gene Family AT5G67090 42.559 0.0 561
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0659 - - gmx:100779169 1364.36