Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0656 ATGGTGGATGAAGAAGAGTTGCAGTTTCATGAGGAGTACATGAATGAACAAGATCCAAGTATTCTACACTTCTTGTTGGCGTCAGGAGATGATGTGTCAAGTAAGCAACTTCGTGATGACTTAATGACAATGCTCATTGCTGGACATGAAACATCAGCTGCTGTTTTAACTTGGACCTTTTATCTTCTATCCAAGGAGCCTAGAGTCGTGTCCAAGCTCCAAGAAGAGGTTGACTCTGTACTTGGAGATCGATTTCCAACTATTGAAGACATGAAGAAACTCAAATATACAACCCGAGTGATCAACGAGGATGATGTTCTTGGAGAGTACCCTATAAAAAGAGGTGAAGATATCTTTATATCTGTCTGGAACCTGCATCGCAGTCCAGAACTGTGGGATGATGCTGATAAGTTTGAACCTGAAAGATGGGCATTAGATGGACCAAATCCTAATGAGACGAATCAAAACTTCAAATATCTTCCGTTTGGTGGAGGACAACGGAAATGTGTAGGTGATTTGTTTGCTTCATACGAGACTGTAGTAGCGCTTGCAATGCTTGTTAGACGGTTCAACTTTCAAATGGCAGTTGGAGCTCCACCAGTTGAGATGACTACTGGAGCTACAATACATACGACACAAGGGTTGAAGATGACTGTAACACACAGAATAAAACCTCCTATTGTGCCCTCATTACAGATGTCAACATTGGAAGTGGATCCATCCATAAGCCTTTCTGATAAGGATGAAATAAGTCAGAAAGGCGAAGTTTTATCAAGCTCAGTCCTAATTGCTGGTGTAACACATTGtaaatcatacaatataaaaatgagtggaaagggggaaaaaaaaagtagaattcGTTTCATTCTTCTAGCTGCTTGA 882 0.3889 MVDEEELQFHEEYMNEQDPSILHFLLASGDDVSSKQLRDDLMTMLIAGHETSAAVLTWTFYLLSKEPRVVSKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINEDDVLGEYPIKRGEDIFISVWNLHRSPELWDDADKFEPERWALDGPNPNETNQNFKYLPFGGGQRKCVGDLFASYETVVALAMLVRRFNFQMAVGAPPVEMTTGATIHTTQGLKMTVTHRIKPPIVPSLQMSTLEVDPSISLSDKDEISQKGEVLSSSVLIAGVTHCKSYNIKMSGKGEKKSRIRFILLAA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0656 293 SUPERFAMILY Cytochrome P450 15 222 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 162 171 IPR017972 GO:0005506|GO:0016705
Ssu3g0656 293 Gene3D Cytochrome P450 2 228 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PANTHER - 1 225 - -
Ssu3g0656 293 PRINTS E-class P450 group I signature 36 53 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PRINTS E-class P450 group I signature 169 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PRINTS E-class P450 group I signature 121 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PRINTS E-class P450 group I signature 159 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PRINTS E-class P450 group I signature 56 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PRINTS P450 superfamily signature 169 180 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PRINTS P450 superfamily signature 47 64 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PRINTS P450 superfamily signature 160 169 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 PANTHER CYTOCHROME P450 FAMILY 4 1 225 - -
Ssu3g0656 293 Pfam Cytochrome P450 12 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu3g0656 293 Pfam Cytochrome P450 98 206 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0656 Ssu-Chr3 15785179 15787969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0656 1 245 Cytochrome P450 AT1G31800 76.604 1.84e-136 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0656 K15747 - gmx:100780770 492.656