Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0635 ATGGGAATGATAGTGGAGGTCGAAAACGGTGACCAAAACGACGCCGCTCTGGTTCCGCCCCCTAACTTCGCCATGGTCGAGGACTGCATTTTCCGATCCAGTTTCCCCACCCCTTCCAATTTCCCCTTTCTCCAAACCCTAAACCTGCGCTCCGTCATATACTTGTGTCCTGAGCCTTATCCGGAAGAAAATCTAGAGTTCCTTCGCTCGCAGAATATTCGGCTCTTTCAATTTGGAATTGAGGGGAAAACGGACGTTTCCATGCCTATTCTCAAGGATTCTATCATGGATGCCCTGAAAGTTTTAATTGaTGTGAGAAATCACCCTGTTTTGATCCATTGCAAGCGAGGAAAGCATAGAACAGGTTGCCTTGTTGGTTGCCTCCGAAAATTACAGAATTGGTGTTTGTCTTCTGTGTTTGAGGAGTATCAACGATTTGCTGGTGTTAAATCCAGGACAACGGATTTAACATTCATAGAAATGTTTGACATCCTAAGCCTGAGTCAGTGCCTCTACAGCATCATCTACCAGTACCATGGCTATGGTTCAAAGAAGCGTCGGTTGTTGTATAAAGATGAGAATGAGAACTTACAGAAGCCCCGACTGACATCATTTTAG 618 0.4515 MGMIVEVENGDQNDAALVPPPNFAMVEDCIFRSSFPTPSNFPFLQTLNLRSVIYLCPEPYPEENLEFLRSQNIRLFQFGIEGKTDVSMPILKDSIMDALKVLIDVRNHPVLIHCKRGKHRTGCLVGCLRKLQNWCLSSVFEEYQRFAGVKSRTTDLTFIEMFDILSLSQCLYSIIYQYHGYGSKKRRLLYKDENENLQKPRLTSF 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0635 205 ProSiteProfiles Dual specificity protein phosphatase domain profile. 22 171 IPR020422 GO:0006470|GO:0008138
Ssu3g0635 205 Pfam Tyrosine phosphatase family 17 165 IPR004861 -
Ssu3g0635 205 Gene3D Protein tyrosine phosphatase superfamily 16 166 IPR029021 -
Ssu3g0635 205 CDD PFA-DSP_Siw14 17 163 - -
Ssu3g0635 205 PANTHER TYROSINE-PROTEIN PHOSPHATASE DSP5 12 186 - -
Ssu3g0635 205 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 17 164 IPR029021 -
Ssu3g0635 205 PRINTS Plant and fungal dual specificity phosphatase signature 90 104 IPR020428 GO:0016791
Ssu3g0635 205 PRINTS Plant and fungal dual specificity phosphatase signature 17 34 IPR020428 GO:0016791
Ssu3g0635 205 PRINTS Plant and fungal dual specificity phosphatase signature 73 87 IPR020428 GO:0016791
Ssu3g0635 205 PRINTS Plant and fungal dual specificity phosphatase signature 54 67 IPR020428 GO:0016791
Ssu3g0635 205 ProSitePatterns Tyrosine specific protein phosphatases active site. 112 122 IPR016130 GO:0016311|GO:0016791
Ssu3g0635 205 PANTHER TYROSINE-PROTEIN PHOSPHATASE 12 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0635 Ssu-Chr3 15458544 15460631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0635 3 201 Protein tyrosine phosphatase (PTP) family AT3G02800 68.844 1.15e-104 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0635 K18045 - gmx:100787713 385.571