Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0626 ATGGGTTCCTGCTTCTCTGTGGAAAGCAGGAGCCCGCACCCCACTTCACCCTCTTCCTCTTTGAGGAAGCGCAAGAGCAACTCCAAGAAGAGGCTTGGATCGAGGGCCTCTTCCTTTGAGTATTGGAGGAATGACCCTCTCCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCCTCCCAAGTTGCCTCCTTGTTCACTCAGCAAGGCAAGAAGGGCACCAACCAGGATGCCATGATTGTTTGGGAGAACTTTTGTTCTAGACAAGATACAATTTTCTGTGGAGTTTTTGATGGCCATGGTCCGTTTGGTCACATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAACGCCCATTGGGAACTTAATGTATCTGGTGAAGAAGTCCTCAAGGAGATTAGCGTTAATACTGCAGGAAGCATGAATTCAGAAGAGGCTGCCTTTGCATCGGCTGATGACGAATCCAGGGTATCTGTTGATGCTGAGGAAGCAGAAAAACACCCAGAAATCTTTCAGGGACTTAAAGAGTCCTTTTTGAAGGCATTCAAAGTAATGGATCGAGAACTGAAGACCCACCAAAGCATTGATTGCTTCTGTAGTGGGACAACAGCAGTAACTCTGGTTAAGCAGGGCTGTGACCTTGTTATTGGAAATGTTGGTGACTCTAGAGCTGTGCTGGGTACAAGAGAGAAAGATGATTCTCTTGTTGCCGTCCAGTTAACCGTGGATCTAAAACCCAATCTTCCAGCTGAAGCAGAGAGAATTCACAAATGTAAAGGGCGTGTTTTTGCTCTTCAGGATGAACCTGAAGTTGCTCGAGTCTGGTTGCCAAACAATGACTCCCCTGGCCTTGCCATGGCAAGAGCATTTGGAGATTTTTGTCTTAAAGATTTTGGCCTGATATCTGTTCCCGAGGTGTCATACAGACGACTCACCGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGGGATTTGGGATGTACTCTCAAACAAAGAAGTGGTGGACATTGTGGCAGCCGCGCCAAGGCGTTCCTTGGCAGCGCGGGCGCTGGTCGAGTCAGCGGTTCGCTCTTGGAGGCACAAGTATCCAACCTCCAAAGTGGATGACTGTGCTGTGGTTTGCCTCTTTCTGGACTCGGACATGCACAAAGTGTGTAGTGCTTCCCATGCAAGTCCAAGGAGCAACCTAGTTCAGGTATCCAAGTCCACAATGGTGATGGGGGAGATGTTTCGGGCCCTACTGGTCTGGAAAGGTCAGGAACTTGCAGGGAAAACAATGAagataataacaacaatgagGAAGAGTCCAAGGAAGAGGAAATAG 1335 0.4779 MGSCFSVESRSPHPTSPSSSLRKRKSNSKKRLGSRASSFEYWRNDPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMIVWENFCSRQDTIFCGVFDGHGPFGHMVAKRVRDSLPLKLNAHWELNVSGEEVLKEISVNTAGSMNSEEAAFASADDESRVSVDAEEAEKHPEIFQGLKESFLKAFKVMDRELKTHQSIDCFCSGTTAVTLVKQGCDLVIGNVGDSRAVLGTREKDDSLVAVQLTVDLKPNLPAEAERIHKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTEKDEFVVLATDGIWDVLSNKEVVDIVAAAPRRSLAARALVESAVRSWRHKYPTSKVDDCAVVCLFLDSDMHKVCSASHASPRSNLVQVSKSTMVMGEMFRALLVWKGQELAGKTMKIITTMRKSPRKRK 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0626 444 CDD PP2Cc 61 381 IPR001932 -
Ssu3g0626 444 Pfam Protein phosphatase 2C 109 360 IPR001932 -
Ssu3g0626 444 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 398 - -
Ssu3g0626 444 SUPERFAMILY PP2C-like 54 382 IPR036457 -
Ssu3g0626 444 SMART PP2C_4 53 379 IPR001932 -
Ssu3g0626 444 MobiDBLite consensus disorder prediction 1 32 - -
Ssu3g0626 444 Gene3D - 57 383 IPR036457 -
Ssu3g0626 444 ProSiteProfiles PPM-type phosphatase domain profile. 62 381 IPR001932 -
Ssu3g0626 444 MobiDBLite consensus disorder prediction 1 22 - -
Ssu3g0626 444 PANTHER ALPHABET, ISOFORM E-RELATED 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0626 Ssu-Chr3 15286663 15290016 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0626 1 395 PP2C-type Phosphatase Gene Family AT3G02750 66.216 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0626 - - gmx:100790373 707.212