Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0621 ATGTGTGGGATATTTGCGTATCTGAATTACAACGTGAACAGAGAGAGAAGATACATCTTGCAGGTTCTCTTCAATGGCCTGAGAAGATTGGAATACCGTGGATACGATTCCGCCGGCATCGCCATCGACGATTCCTCTTCTAAATGCAATTGCAATTCCAATTCCACTCTCTCTTCTCCTCCTCTCGTCTTCCGCCAAGAAGGAAACATCGAATCCCTCGTCAAATCCGTGTACCAAGAGGTGGGAGAAATCGAACTGAACTTGGAGGAATGCTTCGGCACGCACGCGGGAATCGCGCACACTCGCTGGGCGACTCACGGGGAACCTGCTCCGCGGAACAGTCACCCTCAGACCTCTGGTCCTGGAAACGAGTTTTTGGTTGTTCACAACGGAGTCATCACTAATTATGAGGTTTTGAAGGAGACGCTGCTGCGACATGGCTTCACGTTTGAATCTGAGACCGACACCGAGGTCATTCCCAAGCTTGCAAAGTTTGTTTACGACAAGGCGAACGAAGCGGCcgGTGGTCAGGTTGTTACATTCAGTCAAGTTGTTCTAGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATTTTCAAAAGTCTACATTATCCTAATGAATTGATTGCTTGCAAGCGTGGTAGCCCACTGCTGCTAGGTGTTAAAGAATCAACAGAAAATAACGACAATGGTTCAGCATTTGAGGATAACAAATTCCTGTCAAAAGATGGACGGCCCAAAGAATTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGTGGGGTTTCTATTTTGAAGTTTGAGAATGACATGAGAGAACATGGCGCTTCTCTCTCCAGAGCTTTTTCAGTGCGACGTGCATTATCTGTTCTTGAGATGGAGGTTGAGCAAATAAATAAAGGTCATTATGAGCATTATATGCAAAAGGAAATTCATGAGCAACCAGAGTCTCTAACAACCACCATGAGGGGGAGGCTTTTACATCGAGGATCTAACAAATCCAAGTCTGTTCTGTTGGGTGGGCTGAAGGATCACCTCAAAACAATTAGGCGAAGTAGAAGGATAGTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCAGCTAGACCCATCTTGGAAGAACTTTCAGgTGTTCCTGTTACTATGGAAGTTGCTAGTGATCTATTGGACCGGGAGGGGCCAATATACCGAGAAGATACAGCCATTTTTGTAAGTCAATCTGGTGAAACTGCAGACACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTGTGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAgGCATACACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGAGGCGATACAATTTCAAATCAAGCCAGAAGAGAAGCTATCATAGATGGTCTTTATGACCTGCCAAATAAAGTCAGAGAGGTGCTGAAGCTTGATCAGGAGATGAAGGATCTAGCAAAGCAGTTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTTGAGGGTGCTTTGAAAGTAAAGGAAGTGGCACTTATGCATAGTGAAGGGATACTTGCCGGTGAAATGAAGCATGGTCCTTTGGCATTAGTGGATGAAAATCTTccaattgttgttgttgctacaCGTGATGCTTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTCATGCCCGCAAAGGTCGTCTGATAGTTATGTGTTCAAAAGGGGATGCTGCCTCTGTATGCCCTAATGAATATTGTAGGGTAATTGAAGTTCCACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTACCATTACAGCTACTGGCATATCATCTCACTGTTCTCAGGGGACATAATGTCGACCAGCCTCGTAATCTTGCCAAGAGTGTCACAACGCAATAA 2070 0.4362 MCGIFAYLNYNVNRERRYILQVLFNGLRRLEYRGYDSAGIAIDDSSSKCNCNSNSTLSSPPLVFRQEGNIESLVKSVYQEVGEIELNLEECFGTHAGIAHTRWATHGEPAPRNSHPQTSGPGNEFLVVHNGVITNYEVLKETLLRHGFTFESETDTEVIPKLAKFVYDKANEAAGGQVVTFSQVVLEVMRHLEGAYALIFKSLHYPNELIACKRGSPLLLGVKESTENNDNGSAFEDNKFLSKDGRPKELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGVSILKFENDMREHGASLSRAFSVRRALSVLEMEVEQINKGHYEHYMQKEIHEQPESLTTTMRGRLLHRGSNKSKSVLLGGLKDHLKTIRRSRRIVFIGCGTSYNAALAARPILEELSGVPVTMEVASDLLDREGPIYREDTAIFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGGDTISNQARREAIIDGLYDLPNKVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGILAGEMKHGPLALVDENLPIVVVATRDACFSKQQSVIQQLHARKGRLIVMCSKGDAASVCPNEYCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGHNVDQPRNLAKSVTTQ 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0621 689 CDD SIS_GlmS_GlmD_1 374 499 IPR035466 -
Ssu3g0621 689 ProSiteProfiles SIS domain profile. 365 504 IPR001347 GO:0097367|GO:1901135
Ssu3g0621 689 ProSiteProfiles SIS domain profile. 536 679 IPR001347 GO:0097367|GO:1901135
Ssu3g0621 689 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 299 IPR029055 -
Ssu3g0621 689 Pfam Glutamine amidotransferase domain 92 202 - -
Ssu3g0621 689 CDD SIS_GlmS_GlmD_2 531 687 IPR035490 -
Ssu3g0621 689 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 280 IPR017932 -
Ssu3g0621 689 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 689 - -
Ssu3g0621 689 CDD GFAT 2 277 - -
Ssu3g0621 689 Gene3D - 321 688 - -
Ssu3g0621 689 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 286 IPR029055 -
Ssu3g0621 689 SUPERFAMILY SIS domain 320 688 IPR046348 GO:0097367|GO:1901135
Ssu3g0621 689 Pfam SIS domain 369 496 IPR001347 GO:0097367|GO:1901135
Ssu3g0621 689 Pfam SIS domain 540 671 IPR001347 GO:0097367|GO:1901135
Ssu3g0621 689 Gene3D - 525 674 - -
Ssu3g0621 689 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 689 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0621 21 221 PRT Gene Family AT2G16570 25.366 2.70e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0621 K00820 - gmx:100779312 1263.44