Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0594 ATGGTTGTGGGTAGCCAAATTTTCAGTGCTCGTGTTATTGTTAGTTTCGTTCTGCTGATTCTCTGTGGCATGGTTTGTGGGACTGATAGTGATATATTCTGCTTGAAAAGTGTAAAGGGTGCACTTGAGGACCCTAACAATTATTTACAATCATGGAGCTTCAACAACAAAACAGAAGGGTTTATATGCAAGTTTACTGGGGTTGAGTGTTGGCACCCTGATGAGAACAAAGTCTTGAATCTCAAACTGTCCAACATGGGACTCAAGGGCCAGTTTCCTCGCGGAATTCAAAATTGCTCAAGCTTAACAGGATTAGATTTTTCACTTAACAGACTCTCTAAAACCATTCCGGCCGACATATCCACCCTTCTTACGTTTGTGACATCTCTTGATCTGTCTTCAAATGATTTTACTGGGGACATACCTGGGTCCCTTGCAAACTGTACCTATCTTAATAGTCTTAGACTTGACCAAAACCAACTCACTGGACAAATTCCTGCAAACTTAAGTCAGCTCCCTCGGCTTAAGTCGTTTAGTGTTGCCAATAATCTTTTGACAGGGCCAGTTCCAATGTTTAGTAGAGAGGGTGTAGCTAATGCAGAAAGTTATGCAAATAATTTAGGCCTCTGTGGTGGTCCCTTGGAGGCTTGCCAGGCCAAGTCTTCAAAGAGTAACACTGCAGTAATAGCTGGAGCAGCTGTTGGTGGTGTGACCGTCGCAGCATTAGGATTGGGCATTGCAATGTTCTTCTATGTGCGCCATATTTCTTAcaggaaaaaggaagaagaccCTGAAGGAAACAAGTGGGCAACAAGTCTAAAGGGAACTAAAACAATAAAGGTTTCTATGTTTGAGAAGACAATTTCAAAAATGAACTTGAGTGATCTCATGAAGGCTACTAATAACTTCAGTAAAAGCAATATTATTGGGACTGGAAGATCAGGAACTGTTTACAAAGCTGTCCTTAATGATGGCACATCACTCATGGTTAAGAGATTGCAGGAATCTCAACACTCAGAGAAAGAATTTCTGGCTGAGATGACTACTCTAGGGTCTGTCAAACATCGTAACTTGGTTCCTCTTTTAGGTTTTTGCCTGGCCAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACCCTCCATGATCAACTACATCCTGCTACTGGTGCTTGCACCATGGAATGGCCTCTAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGTATTATTCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCAAAATTTCTGATTTTGGCCTTGCTAGATTGATGAACCCAATTGATACACATTTGAGTACTTTTGTAAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAATATGCAAAAACTTTGGTGGCTACACCTAAGGGTGATGTTTATAGCTTCGGGACCGTGCTTCTCGAGTTGGTGACAGGTGAAAGACCTACCCATGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATTTGGTAGAATGGATTACACAGCAATCTAGCAATGCAAAACTCCATGCTGCCATTGATGAATCACTAGTTGGGAAGGGTGTAGACCAGGAGCTTTTCCAATTTCTGAAGGTTGCATGCAACTGTGTTACAGCAATGCCAAAGGAGAGGCCTACCATGTTTGAAGTATACCAGCTTCTAAGAGCCATTGGGAGCAATTATAATTTCACAACGGAGGATGAGATAATGGTGCCTGTAGACGTTGGTGATGCTGATAACTTAGTAGAACTTATTGTAGCTCGAGAGGGACATGATTGA 1848 0.4156 MVVGSQIFSARVIVSFVLLILCGMVCGTDSDIFCLKSVKGALEDPNNYLQSWSFNNKTEGFICKFTGVECWHPDENKVLNLKLSNMGLKGQFPRGIQNCSSLTGLDFSLNRLSKTIPADISTLLTFVTSLDLSSNDFTGDIPGSLANCTYLNSLRLDQNQLTGQIPANLSQLPRLKSFSVANNLLTGPVPMFSREGVANAESYANNLGLCGGPLEACQAKSSKSNTAVIAGAAVGGVTVAALGLGIAMFFYVRHISYRKKEEDPEGNKWATSLKGTKTIKVSMFEKTISKMNLSDLMKATNNFSKSNIIGTGRSGTVYKAVLNDGTSLMVKRLQESQHSEKEFLAEMTTLGSVKHRNLVPLLGFCLAKKERLLVYKNMPNGTLHDQLHPATGACTMEWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYAKTLVATPKGDVYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWITQQSSNAKLHAAIDESLVGKGVDQELFQFLKVACNCVTAMPKERPTMFEVYQLLRAIGSNYNFTTEDEIMVPVDVGDADNLVELIVAREGHD 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0594 615 ProSiteProfiles Protein kinase domain profile. 303 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g0594 615 Gene3D Phosphorylase Kinase; domain 1 264 376 - -
Ssu3g0594 615 SUPERFAMILY Protein kinase-like (PK-like) 280 577 IPR011009 -
Ssu3g0594 615 PANTHER LRR RECEPTOR-LIKE KINASE 6 592 - -
Ssu3g0594 615 Gene3D Transferase(Phosphotransferase) domain 1 378 597 - -
Ssu3g0594 615 Pfam Protein tyrosine and serine/threonine kinase 306 576 IPR001245 GO:0004672|GO:0006468
Ssu3g0594 615 Pfam Leucine rich repeat N-terminal domain 29 71 IPR013210 -
Ssu3g0594 615 PANTHER RECEPTOR-LIKE PROTEIN 55 6 592 - -
Ssu3g0594 615 Gene3D Ribonuclease Inhibitor 29 219 IPR032675 -
Ssu3g0594 615 CDD STKc_IRAK 309 577 - -
Ssu3g0594 615 SUPERFAMILY L domain-like 29 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0594 Ssu-Chr3 14785621 14787868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0594 3 591 Receptor kinase-like Gene Family AT3G28450 45.118 0.0 530
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Ssu3g0594 PK_Tyr_Ser-Thr 2.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0594 - - gmx:100817267 1071.23