Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0557 ATGGCAACAATGCGAATGCCACGTGGTATCTATGTCACTCAAAATGTCTATTTGTATAGTGCTGACGTGGAGAAAGCAAAAGAAGCAATTATTTACTCATATAATAGACACATCAATGGCTTTGCTGCCCTACTTGAGGAGGAAGAAGCAGCAGATATTGCAAAAAACTCAAATGTGGTGTCTGTGTTCTTGAGCAAAGAACATAAATTGCACACTACCCGTTCATGGGAATTTCTTGGACTAAACAGAAATGGGAGGAACTCTGCATGGCAAAAGGGAAGATTTGGTCAAAATACAATAATTGGTAACATCGACACAGGTGTTTGGCCTGAATCCCAGAGCTTCAGTGATAAAGGATATGGCCCCGTCCCGTCAAAATGGCGAGGGCGTAATGTTTGCCAAATTAACAAAGTTCCGGGCTCCAGGAGAAATCCATGcaacaggtttttttttttcttccctcttTTACCCTTTGCTTGTTTGAGAAGATTTAAGAAGGGTTGA 504 0.3948 MATMRMPRGIYVTQNVYLYSADVEKAKEAIIYSYNRHINGFAALLEEEEAADIAKNSNVVSVFLSKEHKLHTTRSWEFLGLNRNGRNSAWQKGRFGQNTIIGNIDTGVWPESQSFSDKGYGPVPSKWRGRNVCQINKVPGSRRNPCNRFFFFFPLLPFACLRRFKKG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0557 167 SUPERFAMILY Subtilisin-like 28 117 IPR036852 GO:0004252|GO:0006508
Ssu3g0557 167 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 20 148 - -
Ssu3g0557 167 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 12 71 IPR037045 -
Ssu3g0557 167 Pfam Peptidase inhibitor I9 21 71 IPR010259 -
Ssu3g0557 167 Gene3D Peptidase S8/S53 domain 72 150 IPR036852 GO:0004252|GO:0006508
Ssu3g0557 167 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 20 148 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0557 Ssu-Chr3 14090876 14093760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0557 24 148 Subtilisin-like Serine Gene Family AT5G59810 58.594 2.85e-44 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0557 - - gmx:100813564 234.572