Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0551 ATGACGGTGAAAGGGGAAGAAAGCAATGGGTCGTTTCATTTGGGAAATAAAGAGAGGGAAGAGGGAGAGCAATGTTACATTGTATACTTGGGAGCTCATTCTCATGGTCCTAGCCCTACGTTTCTTGACCTCGAAATTGCTACGTATTCTCATTACGATTTGCTAGGTTCAATCCTGGGAAGTCAGGAGAAAGCAAAAGAAGCAATTATTTACTCATATAATAGACACATCAATGGCTTTGCTGCGCTACTTGAGGAGGAAGAAGCAGCAGATATTGCAAAAAACCCAAATGTGGTGTCTGTGTTCTTGAGCAAAGAACATAAATTGCACACTACCCGGTCATGGGAATTTCTCGGATTACACAGAAATGGTAAGAACTCTGCATGGCAAAAGGGAAGATTTGGTGAAAATACAATAATTGGTAATATCGACACAGGTGTTTGGCCTGAATCCCAGAGCTTCAATGATAAAGGATTTGGCCCCATCCCGTCAAAATGGCGCGGGGGGTGGCTTTACGTCTTTGATACAAATAATGAAGCCCAAGTTTTTGGACTATGTTCGTTAATGAAgGGAGCCAGTCTTTTTGTAAGTTTGCCACCCAATCAAGCCTTTTCTCTGATCCTTGCCACTGACGCTAAACTTGCTAATGCGACATTTCGAGATGCTCAACTTTGTAGGCCTGGAACACTTGATCCTACAAAAGTAAAGGGCAAAATAGTGCGTTGCCTTcgagaaggaaaaataaaatcagttgCGGAGGGTCAGGAGGCTCTGTCTGCAGGTGCCCAGGCAATGCTTATGGGCAATCAAAAGCAAAATGGGAAAACAACTCCTGCTGAGCCTCATGTTTTGTCCACTGTGAACGACCCTAATCCACCTCATCCAAAGCCAGTCACTGATTCTCGCCCACCGCCACCCGCTGCTTTTCACATAACTGCCACGGACGACGTCCCTATAAAATCCGGTGTGACAATAAAAATGTCCCCAGCAAGAACATTATATGGAAGAAAACCAGCTCCAGTTATGGCTTCTTTCTCATCTAGAGGACCCAATAAGATTCAGCCATCGATACTCAAGGTGCACATTTGGATTTGTTAA 1098 0.4326 MTVKGEESNGSFHLGNKEREEGEQCYIVYLGAHSHGPSPTFLDLEIATYSHYDLLGSILGSQEKAKEAIIYSYNRHINGFAALLEEEEAADIAKNPNVVSVFLSKEHKLHTTRSWEFLGLHRNGKNSAWQKGRFGENTIIGNIDTGVWPESQSFNDKGFGPIPSKWRGGWLYVFDTNNEAQVFGLCSLMKGASLFVSLPPNQAFSLILATDAKLANATFRDAQLCRPGTLDPTKVKGKIVRCLREGKIKSVAEGQEALSAGAQAMLMGNQKQNGKTTPAEPHVLSTVNDPNPPHPKPVTDSRPPPPAAFHITATDDVPIKSGVTIKMSPARTLYGRKPAPVMASFSSRGPNKIQPSILKVHIWIC 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0551 365 Pfam Peptidase inhibitor I9 26 110 IPR010259 -
Ssu3g0551 365 MobiDBLite consensus disorder prediction 270 306 - -
Ssu3g0551 365 MobiDBLite consensus disorder prediction 270 284 - -
Ssu3g0551 365 SUPERFAMILY Subtilisin-like 51 156 IPR036852 GO:0004252|GO:0006508
Ssu3g0551 365 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 15 175 - -
Ssu3g0551 365 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 190 360 - -
Ssu3g0551 365 Gene3D - 185 289 - -
Ssu3g0551 365 CDD PA_subtilisin_like 189 287 - -
Ssu3g0551 365 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 190 360 IPR045051 -
Ssu3g0551 365 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 8 110 IPR037045 -
Ssu3g0551 365 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 15 175 IPR045051 -
Ssu3g0551 365 Gene3D Peptidase S8/S53 domain 138 169 IPR036852 GO:0004252|GO:0006508
Ssu3g0551 365 MobiDBLite consensus disorder prediction 288 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0551 Ssu-Chr3 13879498 13891414 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0551 189 362 Subtilisin-like Serine Gene Family AT5G59810 42.045 1.84e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0551 - - gmx:100813564 275.404