Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0543 ATGTCTTGGAGAGCAACCTCTAATAAGGGAGCCAGTCTTTTTGTAAACTTGCCACCTAATCAGGCCTTTTCTCTGATCCTTGTCACTGATGCTAAACTTGCTAATGCGACAATTCGAGATGCTCAACTTTGTAGGCCCGGAACACCTGGTCCTACAAAAGTAAATGGCAAAATAGTGGCATGCACTcgtgaaggaaaaataaaatcagttgCTGAGGGTCAGGAAGCTCTATCTGCGGGCGCAAGGGGAATGATTTTGGACAATCAAAAGCAAAATGGGAACACACTTGAAGCTGAGCCTCATGTTTTCTCCACTGCAAATTGTTATAAGAGCCATCGGAAAAACGTGCCTCCAGCGACTCGTGATAATGCCATATCTTCCCCGCCTGGTCGTTTTGACATAACAACCacAACATTACTTGGAAGAAAGCCAGCTCCAGTTATGGCTTCATTCTCATCTAGAGGACCCAAAAAGATTCAGCCATCGAAACTCAAGCCTGATGTAACTCTGCCTGGTGTGAACATACTTGCTGCCTATTCACAAAACGCAAGTGCATCTAACTTGCTAACAGACGGTCGTCGTGGGTTTAAATTCAATGTATTGCAAGGAACTTCAATGTCTTGCCCTCATGTCGCGGGCATCGCTGGACTTCTCAAAACACTTCATCCTACTTGGAGTCCTGCAGCTATTAAATCAGCAATCATGACCACAGGGGTGCCGCTGGTGATAGAAGGACTCGTCCCAGATCAAACCCTTCGTGTGGAAACACGTACTCCATCTCCTTCGTCCTCCTTTCTTTGA 801 0.4469 MSWRATSNKGASLFVNLPPNQAFSLILVTDAKLANATIRDAQLCRPGTPGPTKVNGKIVACTREGKIKSVAEGQEALSAGARGMILDNQKQNGNTLEAEPHVFSTANCYKSHRKNVPPATRDNAISSPPGRFDITTTTLLGRKPAPVMASFSSRGPKKIQPSKLKPDVTLPGVNILAAYSQNASASNLLTDGRRGFKFNVLQGTSMSCPHVAGIAGLLKTLHPTWSPAAIKSAIMTTGVPLVIEGLVPDQTLRVETRTPSPSSSFL 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0543 266 ProSiteProfiles Serine proteases, subtilase domain profile. 1 266 - -
Ssu3g0543 266 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 9 241 IPR045051 -
Ssu3g0543 266 Gene3D Peptidase S8/S53 domain 142 241 IPR036852 GO:0004252|GO:0006508
Ssu3g0543 266 Pfam Subtilase family 144 238 IPR000209 GO:0006508|GO:0008236
Ssu3g0543 266 SUPERFAMILY Subtilisin-like 146 243 IPR036852 GO:0004252|GO:0006508
Ssu3g0543 266 ProSitePatterns Serine proteases, subtilase family, serine active site. 203 213 IPR023828 -
Ssu3g0543 266 PANTHER SUBTILISIN-LIKE PROTEASE GLYMA18G48580 9 241 - -
Ssu3g0543 266 CDD PA_subtilisin_like 9 103 - -
Ssu3g0543 266 Gene3D - 10 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0543 Ssu-Chr3 13655666 13667732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0543 7 237 Subtilisin-like Serine Gene Family AT5G59810 47.619 5.15e-54 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0543 - - gmx:100815159 330.487