Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0463 ATGGATGGTGGGCAGTGTGATGTTAATGTCACCGTGAACGTTCCCCTAATTCAAGACCAAAACCAACAACGATGGCATGAAAGAAGCCAAAATTCTGGCATCGATTCTAGCAGTGGCACCACATCTTTCCTCAACACTTGTTTTAATGGACTCAATGCTTTGTCAGGTGTTGGGATACTCTCAGTTCCATATGCTCTTGCATCTGGGGGATGGTTAAGCTTGGCTCTTCTGTTTGCTATTGCCACTGTAGCATTTTACACAAGcatgttgattaaaaaatgcATGGATAAGAATTCGAACATTAGAACCTACCCTGATGTAGGTGAGCTTGCATTTGGAAAGACAGGAAGGTTAATAGTATCGGTGTTAATGTACACGGAGCTATACTTAGTTTCAACAGGGTTCTTGATTCTAGAAGGTGATAACTTGAGTAACTTATTCTGCATTGGGGAGGTTCATATAGCTGGCTTAACAATTGGTGAGAAGCAATTCTTTGTGATACTGGTTGCCCTTATCATCTTGCCTACAGTTTGGCTCGATAATTTGAGTTTACTTTCTTATGTATCTGCAAGCGGAGTATTTGCTTCGGCTATCATCATCCTGTCAATATCATGGACGGCAACATTTGATGTGGTTGGTTTTGATCAAAAGGGAACTCTTGTTAATTGGAATGGGATTCCCACAGCTGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCAGTCTTCCCCACCTTGTACAATTCTATGACAAACAAACACCAGTTCTCTAATGTCCTACTTGTATGCTTTTTGTTAAGCACTGCTGCTTATGCATCTATGGCTATAATTGGTTACCTAATGTTTGGTCCAGACGTTGAATCACAGTTAACATTAAACCTGCCACTAAACAAAGTAAGCTCAAAATTAGCAGTATATACTACCTTGGTCAATCCCATATCCAAGTTTGCTTTGATAGTGACACCAATTACCAATGCTTTGAAAGACTTGCTTCCAAGGACGTACAAGAATAAAGTGACCAGCATCTTAGTTAGCACTGTCTTGGTAATCAGCACTTCCATTGTTGCCCTGACTATTCCCTTCTTTGGGTATCTCATGTCCCTGGTTGGAGCGTTTCTAAGTGTCACAGCTTCTGTTATGTTTCCATGCTTGTGCTACTTGAAGATTTCAGGCACTTACAGAAAATTTGGGTGTGAGACATTAGGCATAGTGACAATAATAATAGCAGCTATAGCAATGGGAATATCGGGGACGTATACCTCTTTGATGGAAATACTCCATCATTTGTAA 1290 0.4 MDGGQCDVNVTVNVPLIQDQNQQRWHERSQNSGIDSSSGTTSFLNTCFNGLNALSGVGILSVPYALASGGWLSLALLFAIATVAFYTSMLIKKCMDKNSNIRTYPDVGELAFGKTGRLIVSVLMYTELYLVSTGFLILEGDNLSNLFCIGEVHIAGLTIGEKQFFVILVALIILPTVWLDNLSLLSYVSASGVFASAIIILSISWTATFDVVGFDQKGTLVNWNGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLSTAAYASMAIIGYLMFGPDVESQLTLNLPLNKVSSKLAVYTTLVNPISKFALIVTPITNALKDLLPRTYKNKVTSILVSTVLVISTSIVALTIPFFGYLMSLVGAFLSVTASVMFPCLCYLKISGTYRKFGCETLGIVTIIIAAIAMGISGTYTSLMEILHHL 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0463 429 PANTHER AMINO ACID TRANSPORTER AVT1J 42 426 - -
Ssu3g0463 429 Pfam Transmembrane amino acid transporter protein 40 416 IPR013057 -
Ssu3g0463 429 PANTHER OS05G0424000 PROTEIN-RELATED 42 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0463 Ssu-Chr3 10596929 10638882 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0463 26 426 Amino Acid or Auxin Permease AAAP Family AT3G28960 58.706 5.19e-172 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0463 K15015 - gmx:100794374 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0463 3 10596929 10638882 Ssu3g0463 3 10596929 10638882 ECH