Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0462 ATGGGATTCCCACGGCTGTTAGCTTGTATGCCTTTTGTTATTGTGCACATCCAGGTCTTCCCCACCTTGTACAATTCCATGACAAACAAACACCAGTTCTCTAATGTTCTACTTGTATGCTTTGTGTTGACCACCGCTGGTTATGCATCCATGGCTGTAATTGGTTACCTAATGTTTGGCCCAGAAGTTGAATCACAGGTAACATTAAACCTCCCATTAAACAAAGTAAGCTCAAATTTAGCAATATATACTACCTTGGTCAATCCCATATCCAAGTTTGCTTTGATGGTGACACCGATTACCCACGCTTTGAAAGACTTGCTTCCAAGAACGAACAGGAATAGAGTTACCAGCATCTTTGTTAGCACTGTCTTGGTAATAAGCATTACCATTGTTGCCTTTACTGTTCCTTTCTTTGGGTATCTTATGTCCCTGGTTGGAGCTTTTTTAAGTGTCACGGCTTCTATTCTGCTTCCATGCTTGTGCTACTTGAAGATTTCATATACTTACAGGAAATTTGGGTGTGAGACGGTAGTCATAGTGGCAATAATAATAGTAGCTATAGTAATGGGAATATCTGGGACTTACATCTCTGTCATGAAAATAATCCACCATTTGTAA 621 0.3994 MGFPRLLACMPFVIVHIQVFPTLYNSMTNKHQFSNVLLVCFVLTTAGYASMAVIGYLMFGPEVESQVTLNLPLNKVSSNLAIYTTLVNPISKFALMVTPITHALKDLLPRTNRNRVTSIFVSTVLVISITIVAFTVPFFGYLMSLVGAFLSVTASILLPCLCYLKISYTYRKFGCETVVIVAIIIVAIVMGISGTYISVMKIIHHL 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0462 206 Pfam Transmembrane amino acid transporter protein 18 199 IPR013057 -
Ssu3g0462 206 PANTHER VACUOLAR AMINO ACID TRANSPORTER 1-LIKE ISOFORM X1 2 204 - -
Ssu3g0462 206 PANTHER OS05G0424000 PROTEIN-RELATED 2 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0462 Ssu-Chr3 10538200 10539074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0462 2 203 Amino Acid or Auxin Permease AAAP Family AT3G28960 53.695 2.80e-73 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0462 K15015 - gmx:100794374 300.056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0462 3 10538200 10539074 Ssu3g0462 3 10538200 10539074 ECH