Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu3g0434 | ATGAGATGGTTGAACTATCTAAAACCAAATATCAAGCGGGGAGATTTTAGTGAAGATGAGGTTGATATGATGATCAGATTGCATAAGCTTTTGGGAAACAGATGGTCCCTTATTGCAGGGAGACTTCCAGGAAGAacttcaaatgatgtgaaaaatTACTGGAACACCTACCTGCGCCATAGAGTATACTCTCACAAGAAAGACAACAACGTAAAAAAGCAAGAGGCCGAATCAACCATGGAACCCCCCAAAGTGATAAAGCCTGTACCTCAAGTTTTCCCAAAATCACCCCTGTGGTTGCAAGGGAAATTCAGTAGTAGTAGTTCCAAAGTTGGTATTAGTGAAGCAGGCGAAGCTTCATCAGGGTCTTGGAATTGGTGGGAAACTTTGTTAGATGAAAAGGAAGACAATGCAGGTAACAACAACGCATGCTTCTTTGGTGGGGGAGATGGGGCGCTTGACCTTTAG | 468 | 0.4188 | MRWLNYLKPNIKRGDFSEDEVDMMIRLHKLLGNRWSLIAGRLPGRTSNDVKNYWNTYLRHRVYSHKKDNNVKKQEAESTMEPPKVIKPVPQVFPKSPLWLQGKFSSSSSKVGISEAGEASSGSWNWWETLLDEKEDNAGNNNACFFGGGDGALDL | 155 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu3g0434 | 155 | PANTHER | TRANSCRIPTION FACTOR MYB113-RELATED | 1 | 103 | - | - | |
Ssu3g0434 | 155 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 8 | 62 | IPR017930 | - | |
Ssu3g0434 | 155 | SMART | sant | 12 | 60 | IPR001005 | - | |
Ssu3g0434 | 155 | Pfam | Myb-like DNA-binding domain | 13 | 58 | IPR001005 | - | |
Ssu3g0434 | 155 | ProSiteProfiles | Myb-like domain profile. | 8 | 58 | IPR001005 | - | |
Ssu3g0434 | 155 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 1 | 103 | - | - | |
Ssu3g0434 | 155 | Gene3D | - | 14 | 86 | - | - | |
Ssu3g0434 | 155 | SUPERFAMILY | Homeodomain-like | 2 | 64 | IPR009057 | - | |
Ssu3g0434 | 155 | CDD | SANT | 16 | 58 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu3g0434 | Ssu-Chr3 | 9830842 | 9833339 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu3g0434 | 1 | 93 | MYB Transcription Factor Family | AT1G66370 | 58.763 | 3.22e-32 | 113 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Ssu3g0434 | Myb_DNA-binding | 1.6e-13 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu3g0434 | - | K16166 | gmx:100781091 | 225.713 |