Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0369 ATGGCTTCAAATAATGGCCGTAAAGCAAGTGAGATCTTCCAAGTTGGTGTCAACTCTACAATTCCACCAACTAAAGTTAGTAGCGTACAAAGTCTCTTGCGCTTCCTAGCACACAATGGATTCTTTGAGATAGTAAGAATCCATGACAacatagaagaaaaggaagcaTATGCTCTAACTGCTGCATCAGAGCTTCTTGTCAAAGGCAATGACCTTTGTCTTGCACCAATGATTAAGGGTGTTCTTGACCCAACAGTGACAGGTTCATGGCATCAGTTGAAGAAGTGGACTTATGAGGATGATCTCACACTATTTGGTATCTCCTTCGGATCACATTTGTGGGACTTTCTTAATAACAACCCTACATATAACAAGTTATTCAATGAGGCAATGGCTAGTGATTCTCAGATGATGAACGTGGCGTTGAGAGATTGCAATTGGGTCTTTGAAGGACTGGAGTCCTTTGTGGACGTTGGTGGTGGAACTGGAATCATGGCCAAGATTATCTGCGAGGCATTTCCTAAGTTGAAATGCATTGTGTTGGAACGTCCAGCTATTGTAGAGAACTTGTCAGGAAGCAACAATGTGACATATGTTGGTGGGGACATGTTTGAATCTATTCCCAAGGCTAATGCAATTCTACTTAAGGGCGCTGACTCAGGAACTAACAAGGTGTTGAGTCAACAACTGACAATCTAA 699 0.4106 MASNNGRKASEIFQVGVNSTIPPTKVSSVQSLLRFLAHNGFFEIVRIHDNIEEKEAYALTAASELLVKGNDLCLAPMIKGVLDPTVTGSWHQLKKWTYEDDLTLFGISFGSHLWDFLNNNPTYNKLFNEAMASDSQMMNVALRDCNWVFEGLESFVDVGGGTGIMAKIICEAFPKLKCIVLERPAIVENLSGSNNVTYVGGDMFESIPKANAILLKGADSGTNKVLSQQLTI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0369 232 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 20 216 - -
Ssu3g0369 232 Pfam O-methyltransferase domain 90 216 IPR001077 GO:0008171
Ssu3g0369 232 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 72 216 IPR029063 -
Ssu3g0369 232 SUPERFAMILY "Winged helix" DNA-binding domain 16 70 IPR036390 -
Ssu3g0369 232 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 232 IPR016461 GO:0008168
Ssu3g0369 232 Gene3D - 2 66 IPR036388 -
Ssu3g0369 232 Gene3D Vaccinia Virus protein VP39 67 226 IPR029063 -
Ssu3g0369 232 PANTHER O-METHYLTRANSFERASE 20 216 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0369 Ssu-Chr3 8087529 8088915 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0369 57 216 Monolignol Biosynthesis Gene Families AT5G54160 32.298 1.05e-22 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0369 K22588 - gmx:100811609 334.724