Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0368 ATGGCCTCAATCAATGGCCGTAAAGCAAGTGATCTCTTTCAAGGTCAAGCTCTCTTGTACAGACACTTGTTTGCCTTCGTAGATTCTATGTATCTCAAATTGATTATTGAGCTTCGCATACCGGACATAATCCACAACCATGGTCAACCCATTACTCTTCCAGAGTTGGTGTCAATTCTACAAGTTCCACTGGCTAAAGTTGGTCAGGTGCATAGACTCATGCGCTACCTGGCACACAATGGATTCTTTGAAAGGGTAAGAATCCATGACAACGGAGAAGAGAAGGAAGCATATGCTCTCACTGCTGCTTCAGAGCTCCTTGTGAAAAGCAATGAGCTTAGTTTAGCTCCAATGGTTGAGTGTATTCTTGACCCAACTCTGTCAGGATCATACCATCAACTGAAGAAGTGGGTTTATGAGGATGATCTCACACTGTTTGATGTCTCCTTAGGATGTCACTTCTGGGATTTTCTTACCAAGAACCCTGCATATAATGAGTCATTCAATGAGGCAATGGCTAGTGATTCTCAATTGAGCAACTTGGCATTGAGAGATTGCAAGTTGGTCTTTGAGGGACTGGAATCCATTGTGGATGTCGGTGGTGGAACTGGAACCACAGCCAGGATTATCTGTGAAGCATTTCCTAACTTGAAATGCATTGTGTTTGACCGTCCACAGGTTGTAGAGCACTTGTCAGGAACCAACAATTTGACATTTGTTGGTGGGGACATGTTCAAATCTATTCCCAAGGCTGATGCAGTTCTGCTTAAGTGGATTCTACATAACTGGACTGATAAAGATTGCATAAAGATATTAAAGAATTGCAAAGAAGCTATTTTAAATAACAGCAAAAGAGGAAAAGTAATTATCATAGATGTTGTGATAAACGAAAAGCAAGAAGAGCACAAAGTTACCGAACTAAAGCTCCTTATGGATGTAAACATGGCATGTGTTAATGGACAAGAGAGAAGTGAAGAAGAATGGATGAAACTCTTCGTGGAAGCAGGATTCCAAGACTACAAAATCTCTCCTTTGACCGGATATTTGTCTCTTATTGAAATCTATCCTTAG 1071 0.4099 MASINGRKASDLFQGQALLYRHLFAFVDSMYLKLIIELRIPDIIHNHGQPITLPELVSILQVPLAKVGQVHRLMRYLAHNGFFERVRIHDNGEEKEAYALTAASELLVKSNELSLAPMVECILDPTLSGSYHQLKKWVYEDDLTLFDVSLGCHFWDFLTKNPAYNESFNEAMASDSQLSNLALRDCKLVFEGLESIVDVGGGTGTTARIICEAFPNLKCIVFDRPQVVEHLSGTNNLTFVGGDMFKSIPKADAVLLKWILHNWTDKDCIKILKNCKEAILNNSKRGKVIIIDVVINEKQEEHKVTELKLLMDVNMACVNGQERSEEEWMKLFVEAGFQDYKISPLTGYLSLIEIYP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0368 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 356 IPR016461 GO:0008168
Ssu3g0368 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 354 IPR029063 -
Ssu3g0368 356 SUPERFAMILY "Winged helix" DNA-binding domain 10 111 IPR036390 -
Ssu3g0368 356 PANTHER O-METHYLTRANSFERASE 2 355 IPR016461 GO:0008168
Ssu3g0368 356 Gene3D - 1 107 IPR036388 -
Ssu3g0368 356 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Ssu3g0368 356 PANTHER FLAVONOID 4'-O-METHYLTRANSFERASE 2 355 - -
Ssu3g0368 356 Pfam O-methyltransferase domain 131 338 IPR001077 GO:0008171
Ssu3g0368 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Ssu3g0368 356 Gene3D Vaccinia Virus protein VP39 108 356 IPR029063 -
Ssu3g0368 356 CDD AdoMet_MTases 196 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0368 Ssu-Chr3 8065500 8066999 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0368 25 354 Monolignol Biosynthesis Gene Families AT5G54160 32.344 1.38e-48 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0368 K22588 - gmx:100813225 603.979