Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0364 ATGAAAGTGGTACAAGTTTTCAACGTAGCACCAACGTCGGAATCAGAAGAGTTACCAACTCAAACATCGCTTCCCCTCACCTTCTTTGACATACTATGGTTAAGGCTACCACCTGTTCAACGCATCTTCTTCTACGAATTCCCTCACCCAACCCCACTCTTCTTCCATACCCTTCTTCCCAAACTCAAACACTCTCTTGCTCTCGCACTTGGCCACTTTTTTCCTCTTGCTGGACACCTCACTTGGCCCCATCACTCCAAAAACCCCATCATCAATTACAACTCAGGTGACACTGTTTCCTTCACTGTTGCTGAATCTGACGCTGATTTCACTCATCTAGCGGGCACAGATCTTTGTGAAGCTAAAGAAATTCACCATCTTTTACCCCACTTGACCATATCCCATGAACAAGCTACGGTTTTAGCCTTGCAAGTCACTCTATTTCCAAACTCCGGATTTTCCATTGGAATAACCTCACACCATGCTGTTCTAGATGGCAAGACTTCAACATCGTTTATCAAATCCTGGGCTTATCTTTGTAGAGAATCACCCTCTTCATTGCCACCTGAACTTTGTCCCTTCTATGAAAGGGAATTGGTAAAAGACCCCAATCATGTAGGGGCAAAATATCGCAGTGATTGGTTAAAGCAGGGTGGACCCAACAACAGAAGCCTCGTGGTTTGGGATCTGCAAGTTCCAGAAGCTGCAACTAGAGGCTTATTTCACCTGTCTCGTTCAGATATTGAAAAGCTGAAGCAGTTTGTGGTGTCCAAGAAGAAAGGGAACACCAACCTTCGCTTGTCAACGTTTGTGTTATGTGTTGCCTATGCATGCGTTTGCAGGGTGAGAGCAGAGGAAGTGAAAAACGAAAAAGTTACGCTGGCTTTGAATGTTGATTGCAGGGGTCGTTTGGAGCCACCTCTTCCTGCAACATATTTTGGGAACTGTGTTGGGGTCAGACTTGCAACTGCTGAAACAAGAGAATTGTTGGGGGAGGATGGACTAATTGTGGCAGTGGAAGCACTGAGTGATGCACTGGAAACTCTGAAGGATGGAGCGCTGAGTGGGGCAGAAAATTGGTCGTCGTGGTTGCTTGATGGTTTTAACGCTGATATGAAGATGATTGGCGTTGCTGGGTCACCCAGGTTTGAGGCTTACAGTAATGACTTCGGTTGGGGAAGACCAAAGAAGGTGGAGATGGCGTCTATAGACAGAACTGGGGCATTTTGTCTTTCAGATAGCAGAAGTGGCGATGGGGTTGAGATAGGTTTTGTGTCCAAGAAAGAAGCAATGGAAGCCTTTGCTTCTCTCTTTGTCAATGGCCTTCAATCTTGA 1335 0.4592 MKVVQVFNVAPTSESEELPTQTSLPLTFFDILWLRLPPVQRIFFYEFPHPTPLFFHTLLPKLKHSLALALGHFFPLAGHLTWPHHSKNPIINYNSGDTVSFTVAESDADFTHLAGTDLCEAKEIHHLLPHLTISHEQATVLALQVTLFPNSGFSIGITSHHAVLDGKTSTSFIKSWAYLCRESPSSLPPELCPFYERELVKDPNHVGAKYRSDWLKQGGPNNRSLVVWDLQVPEAATRGLFHLSRSDIEKLKQFVVSKKKGNTNLRLSTFVLCVAYACVCRVRAEEVKNEKVTLALNVDCRGRLEPPLPATYFGNCVGVRLATAETRELLGEDGLIVAVEALSDALETLKDGALSGAENWSSWLLDGFNADMKMIGVAGSPRFEAYSNDFGWGRPKKVEMASIDRTGAFCLSDSRSGDGVEIGFVSKKEAMEAFASLFVNGLQS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0364 444 SUPERFAMILY CoA-dependent acyltransferases 232 443 - -
Ssu3g0364 444 PANTHER - 1 444 - -
Ssu3g0364 444 Pfam Transferase family 15 436 - -
Ssu3g0364 444 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 1 444 - -
Ssu3g0364 444 Gene3D - 1 227 IPR023213 -
Ssu3g0364 444 Gene3D - 232 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0364 Ssu-Chr3 7964638 7965972 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0364 42 434 Monolignol Biosynthesis Gene Families AT5G48930 26.108 6.72e-24 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0364 - - gmx:102660160 729.554