Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0362 ATGAAAGTGGTAGAAGTTTTCCGAGTAGCACCAACTTCAGAATCAGAAGAGTTACCAACTCAGACATCGCTTCCCCTCACCTTCTTTGACATACTATGGTTAAGGTTACCTCCTGTTCAACGCGTCTTCTTCTACGAATTTCCTCACCCAACCCCACTCTTCTTCCATACCCTTCTTCCCAAACTCAAACGCTCTCTTTCTCTTGCACTTGGCCACTTTTTTCCTCTTGCAGGCCACCTCACATGGCCCCTTCACTCCGAAAACCCCATCATCAGTTACAACACTGGTGACACTGTTTCCCTCACGGTGACTGAATCTGATGCTGATTTCAACCATCTAGCAGGCACAGATCTCTGTGAAGCTAAAGAAATTCACCATCTCTTACCTCACTTGACCATATCCCATGAACAAGCTACGGTTTTAGCCTTGCAAGTCACTCTATTTCCAAACTCCGGATTTTCCATTGGAATAACCTCACACCATGCTGTTCTAGATGGCAAGACTTCAACATCGTTTATCAAATCCTGGGCTTATCTTTGTAGAGAATCACAATCACCCCCTTCTTTGCCACCTGAACTTTCTCCTTTCTATGAGAGGGAATTAGTAAAAGACCCCAATCATGTAGGGGCAAAATATCGCAGTGATTGGTTAAAGCAAGGTGGACCCAACAACAGAAGCCTCATGGTTTTGGATCTGCAAGTTCCAGAAGATGCAACTAGAGGCCTATTTCAACTGTCTCGTTCGGATATTGAAAAGCTCAAGCAATATGTGGTGTccaagaagaaaaggaacacCAACCTTCACTTGTCAACGTTTGTGTTGTGTGTTGCCTACGCATGGGTTTGCAGGGTGAGAGCAGAGGAAACGAAAAGCAAAAACGTTATGTTGGCCTTTAGTGTTGATTGCAGGGGTCGTTTGGAGCCACCTCTTCCTGCAACATATTTTGGGAACTGTGTTGGGGGCAGACTTGCAACTGCTGAAACAAGAGAATTGTTGGGGGAGGATGGACTAACTGTGGCTGTGGAAGCACTGAGTGATGCATTGGAAACTCTGAAGGATGGAGCGCTGAGTGGAGCAGAAAATTGGTCAACATGGTTGCTTGAAGGTTTTAACGATGATGTGAGGGTAATTGGCGTTGCTGGGTCACCCAGGTTTGAGGTTTACAGTAATGACTTTGGTTGGGGAAGACCAAAGAAGGTGGAAATGGTGTCTATAGACAGAACTGCAGCATTTTGTTTTTCAGACAGCAGAAATGATGATAGGGTTGAAATATGTTTTGTGTCCAAGAAAGAAGCAATGGAGGCCTTTGCTTCTCTCTTTGTCAATGGCCTTGAATCTTGA 1341 0.443 MKVVEVFRVAPTSESEELPTQTSLPLTFFDILWLRLPPVQRVFFYEFPHPTPLFFHTLLPKLKRSLSLALGHFFPLAGHLTWPLHSENPIISYNTGDTVSLTVTESDADFNHLAGTDLCEAKEIHHLLPHLTISHEQATVLALQVTLFPNSGFSIGITSHHAVLDGKTSTSFIKSWAYLCRESQSPPSLPPELSPFYERELVKDPNHVGAKYRSDWLKQGGPNNRSLMVLDLQVPEDATRGLFQLSRSDIEKLKQYVVSKKKRNTNLHLSTFVLCVAYAWVCRVRAEETKSKNVMLAFSVDCRGRLEPPLPATYFGNCVGGRLATAETRELLGEDGLTVAVEALSDALETLKDGALSGAENWSTWLLEGFNDDVRVIGVAGSPRFEVYSNDFGWGRPKKVEMVSIDRTAAFCFSDSRNDDRVEICFVSKKEAMEAFASLFVNGLES 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0362 446 PANTHER - 1 445 - -
Ssu3g0362 446 Gene3D - 234 446 IPR023213 -
Ssu3g0362 446 Pfam Transferase family 15 438 - -
Ssu3g0362 446 PANTHER ACYLTRANSFERASE, PUTATIVE-RELATED 1 445 - -
Ssu3g0362 446 SUPERFAMILY CoA-dependent acyltransferases 236 445 - -
Ssu3g0362 446 Gene3D - 1 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0362 Ssu-Chr3 7944631 7945971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0362 42 436 Monolignol Biosynthesis Gene Families AT5G48930 25.845 2.67e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0362 - - gmx:102660160 724.546