Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0353 ATGGACACATCTTGCACACGAATTGATTTAGGAAccatcctcctcctcctcctgtTGTTGTGCCTCCCTTTCCCTTCCATAGCGGATGTTATTTATCGTCCCCATGACCTTTTCAGCATCAACTGTGGCTCACCCAACAACTTTTCCGCGCCCGATGGTCGGAATTGGACTGGAGACATGAGATTCCTCTCAGAAAGCCACGACTCAGTTGCTGCTACTTCACTCGCACCATCTACCCAACAGGGTCCCTTCTCCTCAGCTCGTCTCTCTAGCTCCCAATTCACTTACTCATTCCCTGTCACCGCAGGCAGCCCAAAGTTCCTTCGCCTCTTCTTCTACTCAACTTCATACCAAAACTTTGATCGCCCCAAAGCCTATTTCTCAGTCAAAGCAGGCCCATACATTCTCCTTCAAGATTTCAATGCTTCCCTCAATGCTGATGTTGATAAAAACGCTAACGACATGTTGTTCAGAGAGTATTGCATCAACCTCGAAGATGGCCAGAAGCTCAATATAACCTTCATTCCAAGCACCACAGATTCGTACGCTTTCATCAATGGAATCGAGATTGTTTCAGTGCCCTCTTATCTCTACTACACCAATCCTAAAGTCGACAACACTGGATTGCCGCAACTTGTTGGCCACATGACCCAATATACCATTGAAAGCAACTCTGCTCTCGAGACGACGTACCGTTTAAACGTTGGAGGAGCAACAATACCCTCCTCACGGGACACGGGTATGCTCAGGACCTGGGATGCCGATGACGACTACCTAAAATCCGAAAGTGGACCATCTGTTGATTATAAGAATAACACTAAGCTCAGCTTCATTAAGACTCCTAACTACACGGCACCGGACGAAGTGTACCGATCCTTAAGGAATATGGGACCGGATCCTTCTATGAACATGAGGTTCAACCTCACATGGCTGCTTCCCGTTTATTCTGGATTCACCTACTTGCTAAGGTTACACTTCTGCCAGCTTGACCCGCAAATTGACGAGGCTGGTGAGCAGATGTTCTACATCTTCATTCAGGATCAGTTGGCTACCGATTGGGCAGACGTTCTCCTGTGGAGCGACAACCAGAAGGGTGTACCGGTGGTTAAAGACTACGTAGTTTCCATCCCAGGGAATCGGAAAAAGGTACATCTTTCACTGAAAATGCATCCTCACCCTAGAAGCTGGATCAAGGACGCACAACTAAACGCAATTGAACTCTTCAAAATCAGCGACTCAGGTAGTCTCGCTGAACCGAACTCAGACCCTCCTCCACAAACCCAGGAGGTTCCCCATCAAAGCTCAAACAAGAAAAGCAGCGGCAGCACAAGAACCCTTGCCGCCGTCGCAGGTACAGTTTCCGGTGTCGTTTTGCTTTCCCTTATTGTCGCTTTCTTCCTCATCAAACGCAAGAAGAACGTCGCCGTCGACAATCAAAAGGACGGAACTTCTCACGGCGGTGGCTCTTCATGGCTGCCAACCAATCTCTGCCGTCACTTCTCAATCGCAGAAATCAAAGCCGCCACCAATAACTTCGACGAACTCTTCGTTGTTGGAGTGGGAGGCTTCGGCAACGTGTACAAAGGCTACATCGACGACGGTTCAACACCTGTCGCAGTCAAAAGGCTCAAACCGGGTTCTGAGCAAGGTGTGAAGGAGTTCATGAACGAGATCGAAATGCTTTCTCAACTTCGTCATCTCCATCTTGTTTCCCTTATCGGTTACTGTTACGAGAGTAACGAAATGATACTCGTTTACGATTTCATGGATCGCGGAACCCTCCGTGACCATCTCTACGGCACCGATAACCCTTCTCTGTCATGGAGGCAAAGGCTCCAGATCTGCGTAGGTGCTGCACGAGGACTGCATTATCTTCATACAGGTGCGAAGCACATGATCATTCACCGTGACGTGAAGAGCACCAACATCTTATAG 1935 0.4791 MDTSCTRIDLGTILLLLLLLCLPFPSIADVIYRPHDLFSINCGSPNNFSAPDGRNWTGDMRFLSESHDSVAATSLAPSTQQGPFSSARLSSSQFTYSFPVTAGSPKFLRLFFYSTSYQNFDRPKAYFSVKAGPYILLQDFNASLNADVDKNANDMLFREYCINLEDGQKLNITFIPSTTDSYAFINGIEIVSVPSYLYYTNPKVDNTGLPQLVGHMTQYTIESNSALETTYRLNVGGATIPSSRDTGMLRTWDADDDYLKSESGPSVDYKNNTKLSFIKTPNYTAPDEVYRSLRNMGPDPSMNMRFNLTWLLPVYSGFTYLLRLHFCQLDPQIDEAGEQMFYIFIQDQLATDWADVLLWSDNQKGVPVVKDYVVSIPGNRKKVHLSLKMHPHPRSWIKDAQLNAIELFKISDSGSLAEPNSDPPPQTQEVPHQSSNKKSSGSTRTLAAVAGTVSGVVLLSLIVAFFLIKRKKNVAVDNQKDGTSHGGGSSWLPTNLCRHFSIAEIKAATNNFDELFVVGVGGFGNVYKGYIDDGSTPVAVKRLKPGSEQGVKEFMNEIEMLSQLRHLHLVSLIGYCYESNEMILVYDFMDRGTLRDHLYGTDNPSLSWRQRLQICVGAARGLHYLHTGAKHMIIHRDVKSTNIL 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0353 644 ProSitePatterns Protein kinases ATP-binding region signature. 518 541 IPR017441 GO:0005524
Ssu3g0353 644 SMART serkin_6 512 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g0353 644 SUPERFAMILY Protein kinase-like (PK-like) 487 644 IPR011009 -
Ssu3g0353 644 PANTHER OS07G0166700 PROTEIN 30 644 IPR045272 GO:0004714|GO:0006468
Ssu3g0353 644 Pfam Malectin-like domain 40 410 IPR024788 -
Ssu3g0353 644 Gene3D Phosphorylase Kinase; domain 1 497 588 - -
Ssu3g0353 644 Gene3D - 36 193 - -
Ssu3g0353 644 Gene3D - 225 411 - -
Ssu3g0353 644 ProSiteProfiles Protein kinase domain profile. 512 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ssu3g0353 644 MobiDBLite consensus disorder prediction 415 442 - -
Ssu3g0353 644 Pfam Protein tyrosine and serine/threonine kinase 518 644 IPR001245 GO:0004672|GO:0006468
Ssu3g0353 644 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 30 644 - -
Ssu3g0353 644 Gene3D Transferase(Phosphotransferase) domain 1 589 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0353 Ssu-Chr3 7418891 7420825 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0353 27 644 Receptor kinase-like Gene Family AT3G51550 45.344 9.19e-170 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Ssu3g0353 Malectin_like 3.8e-40 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0353 - - gmx:100814046 942.954