Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ssu3g0352 | ATGACACATGTGAGCACTCAGGTGAAAGGCAGTGTTGGATATTTAGATCCGGAGTATTACAAACGACAGCGTTTGACTGAGAAGTCTGATGTGTACTCGTTTGGGGTGGTGCTGTTGGAGGTATTGTCTGGGAGGCAGCCTTTGCTGCGTATGGTGGAGAAGCAACAGATGTCACTGGTTCATTGGGCAAAGCATCTATATCACAAGGGCTCTCTGGGTGAGATTGTGGATCCAGCACTTATAGGCCAGATAGCACCCGAGTGTTTGCGCAAGTTTGGAGAGGTTGCCTTGAGTTGTTTGCTTGAGGATGGGACTCAGCGACCTTCCATGAACGACATCATTGGGATGCTGGAGTTGGTTCTGCAGCTTCAGGATAGTGCTGTTAATGGAGTGACAGAGAGTCGAGGGGATTATGAAGATAGTGAGGACATGTTTAGCTGTAGCCATAGTAATGTTCATGTTTTGGATACTAGTAATAGCACTGGATTGAACATTACAAGCAATGATAGCTGTGGGAGTAAGGAATCTGACAGGTTGATCCCCGAGAACGTTTTCTCTGAGATTAAGGATCCAAAAGGACGATGA | 585 | 0.465 | MTHVSTQVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLLEVLSGRQPLLRMVEKQQMSLVHWAKHLYHKGSLGEIVDPALIGQIAPECLRKFGEVALSCLLEDGTQRPSMNDIIGMLELVLQLQDSAVNGVTESRGDYEDSEDMFSCSHSNVHVLDTSNSTGLNITSNDSCGSKESDRLIPENVFSEIKDPKGR | 194 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ssu3g0352 | 194 | Pfam | Protein tyrosine and serine/threonine kinase | 4 | 115 | IPR001245 | GO:0004672|GO:0006468 | |
Ssu3g0352 | 194 | ProSiteProfiles | Protein kinase domain profile. | 1 | 121 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Ssu3g0352 | 194 | PANTHER | OS07G0166700 PROTEIN | 2 | 163 | IPR045272 | GO:0004714|GO:0006468 | |
Ssu3g0352 | 194 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 143 | - | - | |
Ssu3g0352 | 194 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 118 | IPR011009 | - | |
Ssu3g0352 | 194 | PANTHER | CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN | 2 | 163 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ssu3g0352 | Ssu-Chr3 | 7418240 | 7418824 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ssu3g0352 | 2 | 194 | Receptor kinase-like Gene Family | AT3G51550 | 49.020 | 1.04e-54 | 184 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_CrRLK1L-1 | Ssu3g0352 | PK_Tyr_Ser-Thr | 2.2e-10 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ssu3g0352 | - | - | gmx:100814046 | 312.383 |