Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0337 ATGATGATGTTTGGTGTGATAGGTGTTACAGTCATTTCTCATGTGGTGTTTGTTCTTGACTTGCTCTGGAATCATATCCAAGTTCCATTCCATAATCCATGGCTCACACAGCGAAGAGTCCACAGCAGATTTCACCACCCTTGTGTCTGGTTCCCCAGAGATGTCACAGATTTGCACCCTTTTGTTACCGTGTTGTCTCCACCACGTACCTTAGAAGATGGCACGTTTCTGATCCCTCTCAGGGCCATTCAGGTCACTGTTGTGTCCCATTCTGGCTTCACCATATGCATCACTTTCAGACACGTGGCTGCCGATGGGAGAGCTTTTCATCACTTCATTAAATTCTGGGCCTCTCTTTGTAAGTCAAAAGGAGACTTGGGCCTAGCTTCCTTTGAAGGCTCTCTTGCTCTGCCATTGCACAACAGGGACATCATTGAAGACCCAAAAGGCCTTAAGCCCATTTTCTTACAAGAATTATGGGGTTCATTACCGGAAAATGTAGAGTCCAAGGGCCTCAAACATGATATTCCTAGTGACATGGTGCGTCATACGTTTGTCTTGAGTCATGACCATGTTGAGAAACTCAAGAAATGGGTCTCTATTAAATGCAAAAGCCTTGGTCTAGCAATACCACACCTAACAACCTTTGTGGTAACATGCTCTTTGATTTGGGTTTGTAAGGTGAAATCAGAAGAGACTAAGGTTGGTACAGTACTTGCCAATAATGATGAGTCCTACATGTTGGCTTTTATGGCAGATTCCCGTAATCGTCCTGAATTTTCAATTCCATCGGAATACTTTGGAAATTGTTTGGTTTGTGGCAATGTTGCAGTCAAGAGGAGCAAGCTTGTGGGAGGAAATGGTATTTTGGAAGCATCTATTGCTATTGGTAGCGAAGTTAGACACTTGCAAATTGAAACTTTTGAAGGGACTGAAACATTGATGTCAAATTTTAGAGAATTTGCTACACTGGGAAAGCATATGACGATAATTGCAGGCTCACCAAAGCTGGAAGTGTATGAAACTGACTTTGGGTGGGGGAAGCCCAAGAGGAGTGTAGTAGTTCATGTAGACAATTCAGGATCAATCTCCCTTTCTGATTGTAGGGACAAAGAAGGTCGAATTGAAGTTGGGTTAGCGCTTCAAAAGATTCAACTGAATAAATTCAGTATCATTTTGGAACAGCACCTCACAGAAATTGCAGTTCTTCACTGA 1215 0.428 MMMFGVIGVTVISHVVFVLDLLWNHIQVPFHNPWLTQRRVHSRFHHPCVWFPRDVTDLHPFVTVLSPPRTLEDGTFLIPLRAIQVTVVSHSGFTICITFRHVAADGRAFHHFIKFWASLCKSKGDLGLASFEGSLALPLHNRDIIEDPKGLKPIFLQELWGSLPENVESKGLKHDIPSDMVRHTFVLSHDHVEKLKKWVSIKCKSLGLAIPHLTTFVVTCSLIWVCKVKSEETKVGTVLANNDESYMLAFMADSRNRPEFSIPSEYFGNCLVCGNVAVKRSKLVGGNGILEASIAIGSEVRHLQIETFEGTETLMSNFREFATLGKHMTIIAGSPKLEVYETDFGWGKPKRSVVVHVDNSGSISLSDCRDKEGRIEVGLALQKIQLNKFSIILEQHLTEIAVLH 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0337 404 Pfam Transferase family 76 390 - -
Ssu3g0337 404 Gene3D - 176 399 IPR023213 -
Ssu3g0337 404 PANTHER - 42 402 - -
Ssu3g0337 404 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 42 402 - -
Ssu3g0337 404 Gene3D - 28 169 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0337 Ssu-Chr3 6612186 6615646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0337 74 400 Monolignol Biosynthesis Gene Families AT5G48930 22.156 7.83e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0337 - - gmx:100782335 600.127