Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0329 ATGGCATCAGCGACGCCCCTTTTGAAAGATGAGCTCGACATCGTGATCCCCACGATCAGGAACCTCGATTTCTTGGAGATGTGGAGGCCATTCTTTCAGCCTTACCATCTCATAATTGTGCAAGATGGCGACCCTTCAAAGACCATCAAGGTCCCTGAAGGCTTTGACTATGAGCTCTACAACCGCAATGACATCAACAGGATTCTTGGCCCCAAGGCCAATTGCATCTCCTTCAAGGACTCTGCATGCCGTTGCTTTGGCTACATGGTGTCCAAGAAGAAGTACATCTACACTATTGATGATGACTGCTTTGTTGCCACTAATCCATCTGGAGACAAGATTAATGCACTTGAGCAGCATATAAAAAACCTTCTCTGCCCATCCACACCATACTTTTTCAACACCCTCTATGAACCTTTCCGAGAAGGTGCAGATTTTGTTCGTGGTTACCCCTTCAGTCTCCGTGAAGGTGTACCAACTGCAGTCTCTCATGGTCTTTGGCTCAACATCCCAGACTATGATGCTCCTACTCAGCTTGTGAAGCCTCTTGAGAGGAACACAAGGTATGTGGATGCTGTCATGACCATACCAAAGGGCACTTTGTTTCCCATGTGTGGAATGAACTTGGGCTTTGATCGCGATCTCATTGGACCAGCAATGTACTTTGGTCTTATGGGTGATGGTCAGCCTATTGGACGCTATGACGACATGTGGGCTGGCTGGTGCTGCAAGGTAATCTGTGATCACTTGGGATTGGGAATCAAGACTGGTCTGCCCTATATCTATCACAGCAAGGCCAGTAACCCATTTGTAAATCTGAGGAAGGAGTACAAAGGCATATTCTGGCAAGAAGACATTATTCCATTTTTCCAGAGCATTGTTCTTCCAAAAGAAGCTACCACTGTTCAGAAATGCTACATTGAGCTTGCCAAGCAAGTCAAGGAAAAGCTTACCAAGGTAGATCCTTACTTTGACAAGTTGGCAGATGCCATGGTCACTTGGATTGAAGCTTGGGATGAGCTTAACCCTGTTGGAGCATCAGTGGCCAATGGCAAAGCGTGA 1062 0.4661 MASATPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKTIKVPEGFDYELYNRNDINRILGPKANCISFKDSACRCFGYMVSKKKYIYTIDDDCFVATNPSGDKINALEQHIKNLLCPSTPYFFNTLYEPFREGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLGFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCCKVICDHLGLGIKTGLPYIYHSKASNPFVNLRKEYKGIFWQEDIIPFFQSIVLPKEATTVQKCYIELAKQVKEKLTKVDPYFDKLADAMVTWIEAWDELNPVGASVANGKA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0329 353 PIRSF UPTG 2 346 IPR004901 GO:0016866|GO:0071669
Ssu3g0329 353 Pfam Reversibly glycosylated polypeptide 8 342 IPR037595 -
Ssu3g0329 353 PANTHER UDP-ARABINOSE MUTASE 3 346 IPR037595 -
Ssu3g0329 353 PANTHER ALPHA-1,4-GLUCAN-PROTEIN SYNTHASE [UDP-FORMING]-LIKE PROTEIN 3 346 - -
Ssu3g0329 353 SUPERFAMILY Nucleotide-diphospho-sugar transferases 12 217 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0329 Ssu-Chr3 6273932 6276060 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0329 K13379 - gmx:100784882 728.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g2188 8 57690552 57693052 Ssu3g0329 3 6273932 6276060 PCT