Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0285 ATGATTCAGAACAACATCCCCATATTTCAACTCCACAAACTCTCAAACCAATTCTATGGTTTCCAGAACCCTCCTCAAGGGGTTGCAGACTTCAGCCCTCCTCAGTCCACATGCATCAGCAGCAACTCCACCTCTGATGAGGCAGATGAGCAACAGCAAAGTCTCATCAATGAGAGGAAGCACAGGAGGATGATATCGAACCGCGAGTCGGCACGCCGATCACGCATGAGGAAGCAGAAACACCTTGATGAACTGTGGTCACAGGTGGTTTGGCTCAGGAACGAAAATCACCAGCTAATGGACAAGCTGAACCATGTGTCAGAGTCACACGATAGAGTTGCTCAGGAAAATGTTCAGCTGAGAGAAGAGGCCTCAGAACTTCGCCAAATGATATGTGACATGCAGCTACACAGTCCGTCATACCCTCCTCCTTTGAGCCCCATTGAAGATGATGTCTCCCCCTATGTGAAATCTGATTCCTCAATCACGAGCTCTGTGGACCTGCTTGGTTGA 513 0.4893 MIQNNIPIFQLHKLSNQFYGFQNPPQGVADFSPPQSTCISSNSTSDEADEQQQSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLMDKLNHVSESHDRVAQENVQLREEASELRQMICDMQLHSPSYPPPLSPIEDDVSPYVKSDSSITSSVDLLG 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0285 170 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 170 IPR044521 -
Ssu3g0285 170 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 120 IPR004827 GO:0003700|GO:0006355
Ssu3g0285 170 Coils Coil 110 130 - -
Ssu3g0285 170 PANTHER BZIP TRANSCRIPTION FACTOR 1 170 - -
Ssu3g0285 170 MobiDBLite consensus disorder prediction 25 51 - -
Ssu3g0285 170 Pfam bZIP transcription factor 59 109 IPR004827 GO:0003700|GO:0006355
Ssu3g0285 170 MobiDBLite consensus disorder prediction 138 157 - -
Ssu3g0285 170 CDD bZIP_plant_GBF1 60 111 IPR045314 GO:0003700|GO:0006355
Ssu3g0285 170 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Ssu3g0285 170 Gene3D - 57 112 - -
Ssu3g0285 170 SUPERFAMILY Leucine zipper domain 59 109 IPR046347 GO:0003700|GO:0006355
Ssu3g0285 170 SMART brlzneu 55 119 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0285 Ssu-Chr3 5034701 5035213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0285 18 154 bZIP Transcription Factor Family AT3G30530 64.286 9.88e-54 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ssu3g0285 bZIP_1 5.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0285 - - gmx:100500497 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0285 3 5034701 5035213 Ssu3g0285 3 5034701 5035213 ECH
Ssu8g2153 8 56483037 56483651 Ssu3g0285 3 5034701 5035213 PCT