Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0282 atgaggccAATAAACAGTgtatcatcatcaccaatcagTTCCAGTGGGATTAAAATATGGAAGTCTCCAATTCCTTACCTGTTTGGAGGCTTAGCAGCAATGCTGGCTCTCATATCTGTGGCATTGGTGATCCTTGTTTGCTCCTACAGAAAACGTGCTTCTCAGTCATCACCTGAAGGTGAAGACATGAAAGAAGCAATGCCTAAGATCATAGAGTTAAACTCAGATCCCGAGGTTCTTGTCATAATGGCTGGGGATCACAAACCCACATACCTTGCCAAACCAATCTCTTCTACAGTTTACTGCACTTGTGGGGCTGAATCTCAACCTCAACCAACCCCTTCATCGACCTCATCCACTGAGCAAAGCTTAACCAATTAA 381 0.4068 MRPINSVSSSPISSSGIKIWKSPIPYLFGGLAAMLALISVALVILVCSYRKRASQSSPEGEDMKEAMPKIIELNSDPEVLVIMAGDHKPTYLAKPISSTVYCTCGAESQPQPTPSSTSSTEQSLTN 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0282 126 PANTHER PROTEIN, PUTATIVE-RELATED 1 117 - -
Ssu3g0282 126 MobiDBLite consensus disorder prediction 105 126 - -
Ssu3g0282 126 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 1 117 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0282 Ssu-Chr3 5005658 5006038 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0282 20 111 Glutamine Dumper (GDU) Family AT4G25760 47.959 3.23e-23 85.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0282 - - gmx:100781671 131.339