Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0278 atgaactcAACCATAGGTGAATCAGGAGCAGCTGGTTTCAAAAACTTGAGTTCTCCCATTCCCTACCTCTTTGGTGGCTTAGCCCTCATGCTTGCAGTCATAGCAGTTGCATTACTCATCCTAGCTTGTTCTTATCGTAAACAATATTATTCTTCTAACTCAGCCAGTGATGAAGAGAAACCACCCAAGATGGTGGATAAGGAGGTGAATGTTTCAGAGCCAAAGATTGTTGTGATCATGGCTGGAGAAAGCAACCCCACTTATTTGGCCAAGCCGGTCCCATCCACAAGCCATAATGAACAACCCGTTTGA 312 0.4359 MNSTIGESGAAGFKNLSSPIPYLFGGLALMLAVIAVALLILACSYRKQYYSSNSASDEEKPPKMVDKEVNVSEPKIVVIMAGESNPTYLAKPVPSTSHNEQPV 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0278 103 PANTHER PROTEIN, PUTATIVE-RELATED 8 95 - -
Ssu3g0278 103 PANTHER PROTEIN GLUTAMINE DUMPER 4-RELATED 8 95 IPR040359 GO:0080143
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0278 Ssu-Chr3 4930551 4930862 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g0278 18 101 Glutamine Dumper (GDU) Family AT4G25760 48.421 4.36e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g0278 - - gmx:100784628 161.77